Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.39■■□□□ 1.49
PRPF38AQ8NAV1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.39■■□□□ 1.49
PRPF38AQ8NAV1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PRPF38AQ8NAV1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PRPF38AQ8NAV1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.39■■□□□ 1.49
PRPF38AQ8NAV1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PRPF38AQ8NAV1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 AC069152.1-201ENST00000438030 544 ntBASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 CD99P1-205ENST00000527459 561 ntBASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 AC133041.1-202ENST00000642053 222 ntBASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.38■■□□□ 1.49
PRPF38AQ8NAV1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 AL512625.2-201ENST00000417533 625 ntBASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 AC069236.1-201ENST00000604339 616 ntBASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 AC243732.1-201ENST00000612648 864 ntBASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 AC008694.1-202ENST00000636953 945 ntBASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PRPF38AQ8NAV1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 KRT18P6-201ENST00000555540 1265 ntBASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PRPF38AQ8NAV1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 AC026471.6-201ENST00000622954 1905 ntBASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 ABHD17AP1-201ENST00000358206 933 ntBASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 AL162412.1-201ENST00000567129 965 ntBASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 MKRN4P-201ENST00000444706 1521 ntBASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PRPF38AQ8NAV1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 MIR4758-201ENST00000577688 71 ntBASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 AL591742.1-201ENST00000604433 565 ntBASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PRPF38AQ8NAV1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PRPF38AQ8NAV1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
PRPF38AQ8NAV1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PRPF38AQ8NAV1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PRPF38AQ8NAV1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PRPF38AQ8NAV1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PRPF38AQ8NAV1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PRPF38AQ8NAV1 MIPEPP3-201ENST00000412105 444 ntBASIC24.33■■□□□ 1.49
PRPF38AQ8NAV1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.33■■□□□ 1.49
PRPF38AQ8NAV1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
PRPF38AQ8NAV1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PRPF38AQ8NAV1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PRPF38AQ8NAV1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PRPF38AQ8NAV1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms