Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SLC44A3Q8N4M1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 AC008403.3-201ENST00000598924 454 ntBASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC44A3Q8N4M1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 AC061975.6-201ENST00000579045 1553 ntBASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC44A3Q8N4M1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SLC44A3Q8N4M1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.7■■□□□ 1.07
SLC44A3Q8N4M1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 KRT17P1-201ENST00000399211 1546 ntBASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A3Q8N4M1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 AL355472.2-201ENST00000422958 438 ntBASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A3Q8N4M1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A3Q8N4M1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 AC137767.1-201ENST00000602918 1920 ntBASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC44A3Q8N4M1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms