Protein–RNA interactions for Protein: Q8N0V4

LGI2, Leucine-rich repeat LGI family member 2, humanhuman

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI2Q8N0V4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LGI2Q8N0V4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LGI2Q8N0V4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
LGI2Q8N0V4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
LGI2Q8N0V4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LGI2Q8N0V4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.76■■□□□ 1.07
LGI2Q8N0V4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LGI2Q8N0V4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LGI2Q8N0V4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LGI2Q8N0V4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
LGI2Q8N0V4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LGI2Q8N0V4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.76■■□□□ 1.07
LGI2Q8N0V4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
LGI2Q8N0V4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LGI2Q8N0V4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LGI2Q8N0V4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LGI2Q8N0V4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LGI2Q8N0V4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LGI2Q8N0V4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LGI2Q8N0V4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.75■■□□□ 1.07
LGI2Q8N0V4 MFSD11-216ENST00000590393 1141 ntBASIC21.75■■□□□ 1.07
LGI2Q8N0V4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LGI2Q8N0V4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LGI2Q8N0V4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
LGI2Q8N0V4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LGI2Q8N0V4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LGI2Q8N0V4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 AC061975.6-201ENST00000579045 1553 ntBASIC21.74■■□□□ 1.07
LGI2Q8N0V4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 POU5F1P4-201ENST00000413175 1085 ntBASIC21.74■■□□□ 1.07
LGI2Q8N0V4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 CLDN5-201ENST00000403084 2357 ntBASIC21.74■■□□□ 1.07
LGI2Q8N0V4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LGI2Q8N0V4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 AC090192.1-201ENST00000517740 490 ntBASIC21.73■■□□□ 1.07
LGI2Q8N0V4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 AC120498.10-201ENST00000621827 505 ntBASIC21.73■■□□□ 1.07
LGI2Q8N0V4 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.73■■□□□ 1.07
LGI2Q8N0V4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LGI2Q8N0V4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 AC073111.5-205ENST00000641717 521 ntBASIC21.72■■□□□ 1.07
LGI2Q8N0V4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LGI2Q8N0V4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.71■■□□□ 1.07
LGI2Q8N0V4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LGI2Q8N0V4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.71■■□□□ 1.07
LGI2Q8N0V4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LGI2Q8N0V4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LGI2Q8N0V4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LGI2Q8N0V4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.71■■□□□ 1.07
LGI2Q8N0V4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.71■■□□□ 1.07
LGI2Q8N0V4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LGI2Q8N0V4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms