Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.83■□□□□ 0.93
CPNE9Q8IYJ1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.83■□□□□ 0.92
CPNE9Q8IYJ1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.83■□□□□ 0.92
CPNE9Q8IYJ1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CPNE9Q8IYJ1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CPNE9Q8IYJ1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CPNE9Q8IYJ1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE9Q8IYJ1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE9Q8IYJ1 TPRG1LP1-201ENST00000598702 760 ntBASIC20.82■□□□□ 0.92
CPNE9Q8IYJ1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE9Q8IYJ1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CPNE9Q8IYJ1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
CPNE9Q8IYJ1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
CPNE9Q8IYJ1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE9Q8IYJ1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE9Q8IYJ1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE9Q8IYJ1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.79■□□□□ 0.92
CPNE9Q8IYJ1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE9Q8IYJ1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE9Q8IYJ1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE9Q8IYJ1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.78■□□□□ 0.92
CPNE9Q8IYJ1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE9Q8IYJ1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.78■□□□□ 0.92
CPNE9Q8IYJ1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.78■□□□□ 0.92
CPNE9Q8IYJ1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE9Q8IYJ1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CPNE9Q8IYJ1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE9Q8IYJ1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE9Q8IYJ1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE9Q8IYJ1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms