Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLX4Q8IY92 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLX4Q8IY92 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.02■■□□□ 1.76
SLX4Q8IY92 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SLX4Q8IY92 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.02■■□□□ 1.76
SLX4Q8IY92 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC26.02■■□□□ 1.76
SLX4Q8IY92 AC233263.1-201ENST00000578059 224 ntBASIC26.02■■□□□ 1.76
SLX4Q8IY92 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.02■■□□□ 1.76
SLX4Q8IY92 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.02■■□□□ 1.76
SLX4Q8IY92 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.76
SLX4Q8IY92 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SLX4Q8IY92 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.01■■□□□ 1.75
SLX4Q8IY92 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SLX4Q8IY92 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SLX4Q8IY92 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.01■■□□□ 1.75
SLX4Q8IY92 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.01■■□□□ 1.75
SLX4Q8IY92 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SLX4Q8IY92 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.01■■□□□ 1.75
SLX4Q8IY92 C1QBPP2-201ENST00000528754 825 ntBASIC26.01■■□□□ 1.75
SLX4Q8IY92 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.01■■□□□ 1.75
SLX4Q8IY92 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SLX4Q8IY92 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26■■□□□ 1.75
SLX4Q8IY92 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLX4Q8IY92 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26■■□□□ 1.75
SLX4Q8IY92 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26■■□□□ 1.75
SLX4Q8IY92 NME6-213ENST00000451657 871 ntTSL 2 BASIC26■■□□□ 1.75
SLX4Q8IY92 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26■■□□□ 1.75
SLX4Q8IY92 CYP2T3P-201ENST00000601990 817 ntBASIC26■■□□□ 1.75
SLX4Q8IY92 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC26■■□□□ 1.75
SLX4Q8IY92 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLX4Q8IY92 AC137767.1-201ENST00000602918 1920 ntBASIC26■■□□□ 1.75
SLX4Q8IY92 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLX4Q8IY92 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26■■□□□ 1.75
SLX4Q8IY92 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
SLX4Q8IY92 ECEL1P3-201ENST00000427961 737 ntBASIC26■■□□□ 1.75
SLX4Q8IY92 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26■■□□□ 1.75
SLX4Q8IY92 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
SLX4Q8IY92 RPPH1-201ENST00000516869 333 ntBASIC26■■□□□ 1.75
SLX4Q8IY92 PNMA6B-201ENST00000538162 1200 ntBASIC26■■□□□ 1.75
SLX4Q8IY92 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26■■□□□ 1.75
SLX4Q8IY92 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26■■□□□ 1.75
SLX4Q8IY92 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26■■□□□ 1.75
SLX4Q8IY92 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLX4Q8IY92 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SLX4Q8IY92 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
SLX4Q8IY92 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
SLX4Q8IY92 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.99■■□□□ 1.75
SLX4Q8IY92 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SLX4Q8IY92 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.99■■□□□ 1.75
SLX4Q8IY92 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
SLX4Q8IY92 AC091799.1-201ENST00000422823 811 ntBASIC25.99■■□□□ 1.75
SLX4Q8IY92 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.99■■□□□ 1.75
SLX4Q8IY92 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SLX4Q8IY92 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.99■■□□□ 1.75
SLX4Q8IY92 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
SLX4Q8IY92 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.99■■□□□ 1.75
SLX4Q8IY92 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SLX4Q8IY92 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SLX4Q8IY92 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SLX4Q8IY92 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC25.98■■□□□ 1.75
SLX4Q8IY92 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SLX4Q8IY92 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SLX4Q8IY92 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.98■■□□□ 1.75
SLX4Q8IY92 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SLX4Q8IY92 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.98■■□□□ 1.75
SLX4Q8IY92 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SLX4Q8IY92 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLX4Q8IY92 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLX4Q8IY92 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLX4Q8IY92 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLX4Q8IY92 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLX4Q8IY92 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.97■■□□□ 1.75
SLX4Q8IY92 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SLX4Q8IY92 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.97■■□□□ 1.75
SLX4Q8IY92 AC073912.3-201ENST00000624414 853 ntBASIC25.97■■□□□ 1.75
SLX4Q8IY92 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLX4Q8IY92 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.96■■□□□ 1.75
SLX4Q8IY92 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.96■■□□□ 1.75
SLX4Q8IY92 AC087742.1-201ENST00000575880 1738 ntBASIC25.96■■□□□ 1.75
SLX4Q8IY92 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLX4Q8IY92 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
SLX4Q8IY92 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.96■■□□□ 1.75
SLX4Q8IY92 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC25.96■■□□□ 1.75
SLX4Q8IY92 AC069544.1-201ENST00000609399 999 ntBASIC25.96■■□□□ 1.75
SLX4Q8IY92 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLX4Q8IY92 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
SLX4Q8IY92 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SLX4Q8IY92 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
SLX4Q8IY92 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SLX4Q8IY92 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.75
SLX4Q8IY92 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.75
SLX4Q8IY92 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.95■■□□□ 1.75
SLX4Q8IY92 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SLX4Q8IY92 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SLX4Q8IY92 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
SLX4Q8IY92 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SLX4Q8IY92 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SLX4Q8IY92 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC25.95■■□□□ 1.74
SLX4Q8IY92 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.94■■□□□ 1.74
SLX4Q8IY92 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms