Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC28Q86X40 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC28Q86X40 AL499627.2-201ENST00000606283 725 ntBASIC18.67■□□□□ 0.58
LRRC28Q86X40 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
LRRC28Q86X40 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC28Q86X40 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC28Q86X40 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC28Q86X40 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC28Q86X40 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
LRRC28Q86X40 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC28Q86X40 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC28Q86X40 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC28Q86X40 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC28Q86X40 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC28Q86X40 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 OXCT2P1-201ENST00000447263 1535 ntBASIC18.66■□□□□ 0.58
LRRC28Q86X40 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC28Q86X40 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC28Q86X40 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 AL136967.2-201ENST00000623968 743 ntBASIC18.66■□□□□ 0.58
LRRC28Q86X40 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC28Q86X40 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC28Q86X40 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC28Q86X40 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRRC28Q86X40 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC28Q86X40 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC28Q86X40 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC28Q86X40 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC28Q86X40 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC28Q86X40 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LRRC28Q86X40 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRRC28Q86X40 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC28Q86X40 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC28Q86X40 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC28Q86X40 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC28Q86X40 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC28Q86X40 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC28Q86X40 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC28Q86X40 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC28Q86X40 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC28Q86X40 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC28Q86X40 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC28Q86X40 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC28Q86X40 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC28Q86X40 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
LRRC28Q86X40 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC28Q86X40 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
LRRC28Q86X40 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.64■□□□□ 0.58
LRRC28Q86X40 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC28Q86X40 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LRRC28Q86X40 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC28Q86X40 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC28Q86X40 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC28Q86X40 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC28Q86X40 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LRRC28Q86X40 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC28Q86X40 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC28Q86X40 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC28Q86X40 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC28Q86X40 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRC28Q86X40 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC28Q86X40 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC28Q86X40 MIR939-201ENST00000401314 82 ntBASIC18.64■□□□□ 0.57
LRRC28Q86X40 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC28Q86X40 AP001330.3-201ENST00000520123 633 ntBASIC18.64■□□□□ 0.57
LRRC28Q86X40 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LRRC28Q86X40 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
LRRC28Q86X40 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC28Q86X40 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC28Q86X40 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC28Q86X40 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LRRC28Q86X40 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
LRRC28Q86X40 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LRRC28Q86X40 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRRC28Q86X40 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRRC28Q86X40 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC28Q86X40 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
LRRC28Q86X40 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC28Q86X40 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRC28Q86X40 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC28Q86X40 AF213884.3-201ENST00000563833 479 ntBASIC18.63■□□□□ 0.57
LRRC28Q86X40 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
LRRC28Q86X40 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms