Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC190Q86UF4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC190Q86UF4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC190Q86UF4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.39■□□□□ 0.54
CCDC190Q86UF4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC190Q86UF4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC190Q86UF4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.39■□□□□ 0.53
CCDC190Q86UF4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC190Q86UF4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC190Q86UF4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CCDC190Q86UF4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC190Q86UF4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC190Q86UF4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC190Q86UF4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC190Q86UF4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC190Q86UF4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC190Q86UF4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC190Q86UF4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 AC022616.5-201ENST00000518796 181 ntBASIC18.38■□□□□ 0.53
CCDC190Q86UF4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC190Q86UF4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 TNXA-203ENST00000507684 2038 ntBASIC18.37■□□□□ 0.53
CCDC190Q86UF4 AL512408.1-201ENST00000569378 2000 ntBASIC18.37■□□□□ 0.53
CCDC190Q86UF4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC190Q86UF4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 AC099778.1-201ENST00000568593 1911 ntBASIC18.36■□□□□ 0.53
CCDC190Q86UF4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCDC190Q86UF4 AP000974.1-201ENST00000623909 2387 ntBASIC18.35■□□□□ 0.53
CCDC190Q86UF4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 AC079089.2-201ENST00000531211 1277 ntBASIC18.35■□□□□ 0.53
CCDC190Q86UF4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC190Q86UF4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms