Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.91■■□□□ 1.1
DENND4AQ7Z401 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.91■■□□□ 1.1
DENND4AQ7Z401 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.91■■□□□ 1.1
DENND4AQ7Z401 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DENND4AQ7Z401 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DENND4AQ7Z401 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DENND4AQ7Z401 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND4AQ7Z401 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND4AQ7Z401 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DENND4AQ7Z401 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND4AQ7Z401 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.9■■□□□ 1.1
DENND4AQ7Z401 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.9■■□□□ 1.1
DENND4AQ7Z401 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.9■■□□□ 1.1
DENND4AQ7Z401 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DENND4AQ7Z401 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.9■■□□□ 1.1
DENND4AQ7Z401 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.9■■□□□ 1.1
DENND4AQ7Z401 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
DENND4AQ7Z401 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.89■■□□□ 1.1
DENND4AQ7Z401 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.89■■□□□ 1.1
DENND4AQ7Z401 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.89■■□□□ 1.1
DENND4AQ7Z401 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
DENND4AQ7Z401 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DENND4AQ7Z401 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
DENND4AQ7Z401 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DENND4AQ7Z401 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DENND4AQ7Z401 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DENND4AQ7Z401 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
DENND4AQ7Z401 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DENND4AQ7Z401 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DENND4AQ7Z401 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 AC091799.1-201ENST00000422823 811 ntBASIC21.88■■□□□ 1.09
DENND4AQ7Z401 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 PNMA6B-201ENST00000538162 1200 ntBASIC21.88■■□□□ 1.09
DENND4AQ7Z401 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 CYP2T3P-201ENST00000601990 817 ntBASIC21.88■■□□□ 1.09
DENND4AQ7Z401 AC069544.1-201ENST00000609399 999 ntBASIC21.88■■□□□ 1.09
DENND4AQ7Z401 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.88■■□□□ 1.09
DENND4AQ7Z401 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 UBE2SP1-201ENST00000450587 669 ntBASIC21.87■■□□□ 1.09
DENND4AQ7Z401 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DENND4AQ7Z401 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 FAM197Y4-202ENST00000622692 608 ntBASIC21.86■■□□□ 1.09
DENND4AQ7Z401 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.86■■□□□ 1.09
DENND4AQ7Z401 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DENND4AQ7Z401 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
DENND4AQ7Z401 AC137767.1-201ENST00000602918 1920 ntBASIC21.85■■□□□ 1.09
DENND4AQ7Z401 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DENND4AQ7Z401 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms