Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 AC104187.1-201ENST00000607510 612 ntBASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 AC053503.5-201ENST00000601508 636 ntBASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD3Q7Z3D4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 AC244015.2-201ENST00000616358 1861 ntBASIC21.18■□□□□ 0.98
LYSMD3Q7Z3D4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD3Q7Z3D4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD3Q7Z3D4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD3Q7Z3D4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms