Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP1BQ7LBR1 AP004607.7-201ENST00000527152 1677 ntBASIC19.33■□□□□ 0.68
CHMP1BQ7LBR1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMP1BQ7LBR1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 KRT18P5-201ENST00000436075 1291 ntBASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 AC079140.4-201ENST00000507448 529 ntBASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP1BQ7LBR1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CHMP1BQ7LBR1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 ESRRAP2-201ENST00000418437 1549 ntBASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP1BQ7LBR1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 AC005224.4-201ENST00000583262 1652 ntBASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CHMP1BQ7LBR1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 AC087742.1-201ENST00000575880 1738 ntBASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHMP1BQ7LBR1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms