Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC1Q6VVB1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 AL121603.2-201ENST00000557373 2117 ntBASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.9■□□□□ 0.62
NHLRC1Q6VVB1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NHLRC1Q6VVB1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NHLRC1Q6VVB1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC1Q6VVB1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
NHLRC1Q6VVB1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 AC123595.1-201ENST00000440769 1046 ntBASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
NHLRC1Q6VVB1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms