Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.15■□□□□ 0.66
NIPAL3Q6P499 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.14■□□□□ 0.66
NIPAL3Q6P499 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.14■□□□□ 0.66
NIPAL3Q6P499 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NIPAL3Q6P499 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 IRS3P-201ENST00000223076 1006 ntBASIC19.14■□□□□ 0.65
NIPAL3Q6P499 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.14■□□□□ 0.65
NIPAL3Q6P499 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 AP004607.7-201ENST00000527152 1677 ntBASIC19.13■□□□□ 0.65
NIPAL3Q6P499 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NIPAL3Q6P499 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.12■□□□□ 0.65
NIPAL3Q6P499 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NIPAL3Q6P499 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NIPAL3Q6P499 AL157384.1-201ENST00000445995 2473 ntBASIC19.12■□□□□ 0.65
NIPAL3Q6P499 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NIPAL3Q6P499 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NIPAL3Q6P499 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.12■□□□□ 0.65
NIPAL3Q6P499 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NIPAL3Q6P499 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NIPAL3Q6P499 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.12■□□□□ 0.65
NIPAL3Q6P499 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.12■□□□□ 0.65
NIPAL3Q6P499 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NIPAL3Q6P499 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NIPAL3Q6P499 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 ZNRF2P3-201ENST00000424200 374 ntBASIC19.11■□□□□ 0.65
NIPAL3Q6P499 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 AC012414.1-201ENST00000556676 535 ntBASIC19.11■□□□□ 0.65
NIPAL3Q6P499 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.11■□□□□ 0.65
NIPAL3Q6P499 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.1■□□□□ 0.65
NIPAL3Q6P499 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.1■□□□□ 0.65
NIPAL3Q6P499 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
NIPAL3Q6P499 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.1■□□□□ 0.65
NIPAL3Q6P499 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NIPAL3Q6P499 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.1■□□□□ 0.65
NIPAL3Q6P499 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.1■□□□□ 0.65
NIPAL3Q6P499 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.1■□□□□ 0.65
NIPAL3Q6P499 AL034346.1-201ENST00000568244 1277 ntBASIC19.1■□□□□ 0.65
NIPAL3Q6P499 AL354811.1-201ENST00000610286 706 ntBASIC19.1■□□□□ 0.65
NIPAL3Q6P499 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NIPAL3Q6P499 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.1■□□□□ 0.65
NIPAL3Q6P499 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms