Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 AC135279.3-201ENST00000610945 1311 ntBASIC19.63■□□□□ 0.73
REEP3Q6NUK4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 IGHV3-19-201ENST00000521488 291 ntBASIC19.63■□□□□ 0.73
REEP3Q6NUK4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.63■□□□□ 0.73
REEP3Q6NUK4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 AC009237.3-201ENST00000393279 1427 ntBASIC19.62■□□□□ 0.73
REEP3Q6NUK4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
REEP3Q6NUK4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.61■□□□□ 0.73
REEP3Q6NUK4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
REEP3Q6NUK4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.6■□□□□ 0.73
REEP3Q6NUK4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
REEP3Q6NUK4 AL157384.1-201ENST00000445995 2473 ntBASIC19.6■□□□□ 0.73
REEP3Q6NUK4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
REEP3Q6NUK4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
REEP3Q6NUK4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
REEP3Q6NUK4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
REEP3Q6NUK4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
REEP3Q6NUK4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
REEP3Q6NUK4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
REEP3Q6NUK4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.6■□□□□ 0.73
REEP3Q6NUK4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.6■□□□□ 0.73
REEP3Q6NUK4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 LINC01521-201ENST00000504184 1943 ntBASIC19.59■□□□□ 0.73
REEP3Q6NUK4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
REEP3Q6NUK4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
REEP3Q6NUK4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms