Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 KRT18P61-201ENST00000585825 1298 ntBASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 AC022517.1-201ENST00000592429 346 ntBASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39BQ5VTQ0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39BQ5VTQ0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.94■■□□□ 1.1
TTC39BQ5VTQ0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39BQ5VTQ0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.94■■□□□ 1.1
TTC39BQ5VTQ0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.94■■□□□ 1.1
TTC39BQ5VTQ0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39BQ5VTQ0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
TTC39BQ5VTQ0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39BQ5VTQ0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39BQ5VTQ0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.94■■□□□ 1.1
TTC39BQ5VTQ0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39BQ5VTQ0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39BQ5VTQ0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39BQ5VTQ0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39BQ5VTQ0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.93■■□□□ 1.1
TTC39BQ5VTQ0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.93■■□□□ 1.1
TTC39BQ5VTQ0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TTC39BQ5VTQ0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39BQ5VTQ0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39BQ5VTQ0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TTC39BQ5VTQ0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39BQ5VTQ0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39BQ5VTQ0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.92■■□□□ 1.1
TTC39BQ5VTQ0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.92■■□□□ 1.1
TTC39BQ5VTQ0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39BQ5VTQ0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39BQ5VTQ0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39BQ5VTQ0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39BQ5VTQ0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39BQ5VTQ0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39BQ5VTQ0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39BQ5VTQ0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
TTC39BQ5VTQ0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39BQ5VTQ0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39BQ5VTQ0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39BQ5VTQ0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39BQ5VTQ0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39BQ5VTQ0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.91■■□□□ 1.1
TTC39BQ5VTQ0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.91■■□□□ 1.1
TTC39BQ5VTQ0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
TTC39BQ5VTQ0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.91■■□□□ 1.1
TTC39BQ5VTQ0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39BQ5VTQ0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39BQ5VTQ0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 AC104187.1-201ENST00000607510 612 ntBASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39BQ5VTQ0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
TTC39BQ5VTQ0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TTC39BQ5VTQ0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
TTC39BQ5VTQ0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39BQ5VTQ0 AL024507.2-201ENST00000606070 2574 ntBASIC21.89■■□□□ 1.09
TTC39BQ5VTQ0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39BQ5VTQ0 EEF1DP3-203ENST00000566025 782 ntBASIC21.89■■□□□ 1.09
TTC39BQ5VTQ0 AC053503.5-201ENST00000601508 636 ntBASIC21.89■■□□□ 1.09
TTC39BQ5VTQ0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39BQ5VTQ0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
TTC39BQ5VTQ0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39BQ5VTQ0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
TTC39BQ5VTQ0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39BQ5VTQ0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
TTC39BQ5VTQ0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 AC137761.2-201ENST00000561729 223 ntBASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 AC145350.3-201ENST00000569033 163 ntBASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 AL137784.2-201ENST00000607332 1000 ntBASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms