Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.52■□□□□ 0.56
UBE2NP61088 AC022517.1-201ENST00000592429 346 ntBASIC18.52■□□□□ 0.56
UBE2NP61088 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2NP61088 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.52■□□□□ 0.55
UBE2NP61088 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.51■□□□□ 0.55
UBE2NP61088 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2NP61088 AC010542.4-201ENST00000563151 1910 ntBASIC18.51■□□□□ 0.55
UBE2NP61088 AC026471.6-201ENST00000622954 1905 ntBASIC18.51■□□□□ 0.55
UBE2NP61088 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2NP61088 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2NP61088 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2NP61088 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.51■□□□□ 0.55
UBE2NP61088 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.51■□□□□ 0.55
UBE2NP61088 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.51■□□□□ 0.55
UBE2NP61088 EEF1DP3-203ENST00000566025 782 ntBASIC18.51■□□□□ 0.55
UBE2NP61088 AC138907.5-202ENST00000569484 235 ntBASIC18.51■□□□□ 0.55
UBE2NP61088 AP001160.3-201ENST00000601484 763 ntBASIC18.51■□□□□ 0.55
UBE2NP61088 AC008175.2-201ENST00000612840 297 ntBASIC18.51■□□□□ 0.55
UBE2NP61088 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2NP61088 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2NP61088 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2NP61088 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
UBE2NP61088 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2NP61088 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2NP61088 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2NP61088 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.5■□□□□ 0.55
UBE2NP61088 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
UBE2NP61088 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2NP61088 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.5■□□□□ 0.55
UBE2NP61088 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2NP61088 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.5■□□□□ 0.55
UBE2NP61088 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.5■□□□□ 0.55
UBE2NP61088 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.5■□□□□ 0.55
UBE2NP61088 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.5■□□□□ 0.55
UBE2NP61088 AL137784.2-201ENST00000607332 1000 ntBASIC18.5■□□□□ 0.55
UBE2NP61088 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2NP61088 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
UBE2NP61088 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.5■□□□□ 0.55
UBE2NP61088 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2NP61088 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2NP61088 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2NP61088 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2NP61088 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.49■□□□□ 0.55
UBE2NP61088 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.49■□□□□ 0.55
UBE2NP61088 KRT18P61-201ENST00000585825 1298 ntBASIC18.49■□□□□ 0.55
UBE2NP61088 AC120498.10-201ENST00000621827 505 ntBASIC18.49■□□□□ 0.55
UBE2NP61088 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2NP61088 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2NP61088 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2NP61088 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.49■□□□□ 0.55
UBE2NP61088 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2NP61088 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2NP61088 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2NP61088 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2NP61088 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.49■□□□□ 0.55
UBE2NP61088 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2NP61088 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2NP61088 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2NP61088 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2NP61088 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2NP61088 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2NP61088 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2NP61088 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2NP61088 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.48■□□□□ 0.55
UBE2NP61088 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2NP61088 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.48■□□□□ 0.55
UBE2NP61088 AC010141.2-201ENST00000452426 721 ntBASIC18.48■□□□□ 0.55
UBE2NP61088 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.48■□□□□ 0.55
UBE2NP61088 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.48■□□□□ 0.55
UBE2NP61088 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2NP61088 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
UBE2NP61088 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
UBE2NP61088 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2NP61088 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2NP61088 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2NP61088 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.47■□□□□ 0.55
UBE2NP61088 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.47■□□□□ 0.55
UBE2NP61088 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.47■□□□□ 0.55
UBE2NP61088 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.47■□□□□ 0.55
UBE2NP61088 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.47■□□□□ 0.55
UBE2NP61088 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 KRT18P11-201ENST00000435214 1283 ntBASIC18.47■□□□□ 0.55
UBE2NP61088 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.47■□□□□ 0.55
UBE2NP61088 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.47■□□□□ 0.55
UBE2NP61088 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.47■□□□□ 0.55
UBE2NP61088 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2NP61088 EP400NL-214ENST00000641289 2402 ntBASIC18.47■□□□□ 0.55
UBE2NP61088 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms