Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3EP60228 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.75■■□□□ 1.07
EIF3EP60228 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.75■■□□□ 1.07
EIF3EP60228 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3EP60228 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.74■■□□□ 1.07
EIF3EP60228 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3EP60228 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3EP60228 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
EIF3EP60228 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.74■■□□□ 1.07
EIF3EP60228 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3EP60228 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.74■■□□□ 1.07
EIF3EP60228 MIR572-201ENST00000384983 95 ntBASIC21.74■■□□□ 1.07
EIF3EP60228 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.74■■□□□ 1.07
EIF3EP60228 AC091305.1-201ENST00000479476 895 ntBASIC21.74■■□□□ 1.07
EIF3EP60228 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
EIF3EP60228 AL136967.2-201ENST00000623968 743 ntBASIC21.74■■□□□ 1.07
EIF3EP60228 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3EP60228 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3EP60228 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3EP60228 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3EP60228 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3EP60228 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.74■■□□□ 1.07
EIF3EP60228 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.74■■□□□ 1.07
EIF3EP60228 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
EIF3EP60228 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.73■■□□□ 1.07
EIF3EP60228 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.73■■□□□ 1.07
EIF3EP60228 AC005224.4-201ENST00000583262 1652 ntBASIC21.73■■□□□ 1.07
EIF3EP60228 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EIF3EP60228 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
EIF3EP60228 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
EIF3EP60228 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EIF3EP60228 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
EIF3EP60228 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.73■■□□□ 1.07
EIF3EP60228 BX005040.4-201ENST00000637145 1518 ntBASIC21.73■■□□□ 1.07
EIF3EP60228 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.73■■□□□ 1.07
EIF3EP60228 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
EIF3EP60228 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EIF3EP60228 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EIF3EP60228 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3EP60228 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.72■■□□□ 1.07
EIF3EP60228 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3EP60228 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3EP60228 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3EP60228 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3EP60228 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3EP60228 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
EIF3EP60228 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
EIF3EP60228 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3EP60228 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3EP60228 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3EP60228 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.71■■□□□ 1.07
EIF3EP60228 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.71■■□□□ 1.07
EIF3EP60228 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3EP60228 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
EIF3EP60228 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3EP60228 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3EP60228 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3EP60228 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.71■■□□□ 1.07
EIF3EP60228 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.71■■□□□ 1.07
EIF3EP60228 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.71■■□□□ 1.07
EIF3EP60228 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3EP60228 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3EP60228 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.71■■□□□ 1.07
EIF3EP60228 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3EP60228 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.71■■□□□ 1.07
EIF3EP60228 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.71■■□□□ 1.07
EIF3EP60228 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
EIF3EP60228 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
EIF3EP60228 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.7■■□□□ 1.06
EIF3EP60228 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
EIF3EP60228 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
EIF3EP60228 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.7■■□□□ 1.06
EIF3EP60228 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.7■■□□□ 1.06
EIF3EP60228 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EIF3EP60228 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.7■■□□□ 1.06
EIF3EP60228 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.7■■□□□ 1.06
EIF3EP60228 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.7■■□□□ 1.06
EIF3EP60228 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EIF3EP60228 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EIF3EP60228 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.7■■□□□ 1.06
EIF3EP60228 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.7■■□□□ 1.06
EIF3EP60228 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EIF3EP60228 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EIF3EP60228 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.69■■□□□ 1.06
EIF3EP60228 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3EP60228 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3EP60228 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3EP60228 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3EP60228 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.69■■□□□ 1.06
EIF3EP60228 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3EP60228 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3EP60228 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3EP60228 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3EP60228 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3EP60228 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.69■■□□□ 1.06
EIF3EP60228 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
EIF3EP60228 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
EIF3EP60228 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EIF3EP60228 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EIF3EP60228 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms