Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.53■□□□□ 0.88
AP1S2P56377 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S2P56377 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S2P56377 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S2P56377 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S2P56377 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.53■□□□□ 0.88
AP1S2P56377 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S2P56377 KRT87P-202ENST00000534226 1464 ntBASIC20.53■□□□□ 0.88
AP1S2P56377 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.53■□□□□ 0.88
AP1S2P56377 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.53■□□□□ 0.88
AP1S2P56377 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S2P56377 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S2P56377 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S2P56377 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S2P56377 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S2P56377 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP1S2P56377 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.52■□□□□ 0.88
AP1S2P56377 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
AP1S2P56377 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP1S2P56377 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.52■□□□□ 0.88
AP1S2P56377 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AP1S2P56377 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AP1S2P56377 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP1S2P56377 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.52■□□□□ 0.87
AP1S2P56377 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
AP1S2P56377 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S2P56377 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.51■□□□□ 0.87
AP1S2P56377 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S2P56377 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.51■□□□□ 0.87
AP1S2P56377 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S2P56377 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.51■□□□□ 0.87
AP1S2P56377 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.51■□□□□ 0.87
AP1S2P56377 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S2P56377 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S2P56377 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.51■□□□□ 0.87
AP1S2P56377 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.51■□□□□ 0.87
AP1S2P56377 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.51■□□□□ 0.87
AP1S2P56377 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S2P56377 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
AP1S2P56377 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S2P56377 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.51■□□□□ 0.87
AP1S2P56377 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
AP1S2P56377 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
AP1S2P56377 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S2P56377 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S2P56377 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S2P56377 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S2P56377 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.5■□□□□ 0.87
AP1S2P56377 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S2P56377 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S2P56377 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.5■□□□□ 0.87
AP1S2P56377 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.5■□□□□ 0.87
AP1S2P56377 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.5■□□□□ 0.87
AP1S2P56377 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.5■□□□□ 0.87
AP1S2P56377 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S2P56377 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
AP1S2P56377 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.5■□□□□ 0.87
AP1S2P56377 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.5■□□□□ 0.87
AP1S2P56377 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S2P56377 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S2P56377 AL024507.2-201ENST00000606070 2574 ntBASIC20.49■□□□□ 0.87
AP1S2P56377 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
AP1S2P56377 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.49■□□□□ 0.87
AP1S2P56377 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
AP1S2P56377 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S2P56377 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S2P56377 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
AP1S2P56377 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
AP1S2P56377 TERF1P2-201ENST00000583350 1212 ntBASIC20.49■□□□□ 0.87
AP1S2P56377 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S2P56377 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
AP1S2P56377 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S2P56377 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S2P56377 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S2P56377 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S2P56377 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S2P56377 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
AP1S2P56377 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S2P56377 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S2P56377 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
AP1S2P56377 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.48■□□□□ 0.87
AP1S2P56377 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S2P56377 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S2P56377 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.48■□□□□ 0.87
AP1S2P56377 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.48■□□□□ 0.87
AP1S2P56377 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.48■□□□□ 0.87
AP1S2P56377 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S2P56377 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.48■□□□□ 0.87
AP1S2P56377 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
AP1S2P56377 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S2P56377 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
AP1S2P56377 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
AP1S2P56377 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S2P56377 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
AP1S2P56377 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S2P56377 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP1S2P56377 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP1S2P56377 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP1S2P56377 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
AP1S2P56377 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms