Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.6■□□□□ 0.73
PSMD4P55036 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.6■□□□□ 0.73
PSMD4P55036 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.6■□□□□ 0.73
PSMD4P55036 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.6■□□□□ 0.73
PSMD4P55036 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PSMD4P55036 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PSMD4P55036 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMD4P55036 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMD4P55036 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.59■□□□□ 0.73
PSMD4P55036 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.59■□□□□ 0.73
PSMD4P55036 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PSMD4P55036 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.59■□□□□ 0.73
PSMD4P55036 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PSMD4P55036 AC079140.4-201ENST00000507448 529 ntBASIC19.59■□□□□ 0.73
PSMD4P55036 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.59■□□□□ 0.73
PSMD4P55036 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMD4P55036 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMD4P55036 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.59■□□□□ 0.73
PSMD4P55036 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.59■□□□□ 0.73
PSMD4P55036 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMD4P55036 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PSMD4P55036 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PSMD4P55036 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PSMD4P55036 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.58■□□□□ 0.72
PSMD4P55036 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.58■□□□□ 0.72
PSMD4P55036 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PSMD4P55036 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.58■□□□□ 0.72
PSMD4P55036 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PSMD4P55036 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PSMD4P55036 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PSMD4P55036 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PSMD4P55036 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.57■□□□□ 0.72
PSMD4P55036 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.57■□□□□ 0.72
PSMD4P55036 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PSMD4P55036 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PSMD4P55036 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.57■□□□□ 0.72
PSMD4P55036 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PSMD4P55036 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PSMD4P55036 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.57■□□□□ 0.72
PSMD4P55036 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PSMD4P55036 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PSMD4P55036 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.57■□□□□ 0.72
PSMD4P55036 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PSMD4P55036 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PSMD4P55036 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PSMD4P55036 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PSMD4P55036 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.57■□□□□ 0.72
PSMD4P55036 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.57■□□□□ 0.72
PSMD4P55036 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.57■□□□□ 0.72
PSMD4P55036 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PSMD4P55036 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.57■□□□□ 0.72
PSMD4P55036 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PSMD4P55036 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.57■□□□□ 0.72
PSMD4P55036 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PSMD4P55036 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PSMD4P55036 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PSMD4P55036 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PSMD4P55036 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PSMD4P55036 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.56■□□□□ 0.72
PSMD4P55036 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.56■□□□□ 0.72
PSMD4P55036 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PSMD4P55036 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PSMD4P55036 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.56■□□□□ 0.72
PSMD4P55036 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PSMD4P55036 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PSMD4P55036 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PSMD4P55036 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PSMD4P55036 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PSMD4P55036 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PSMD4P55036 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PSMD4P55036 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PSMD4P55036 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PSMD4P55036 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PSMD4P55036 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PSMD4P55036 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PSMD4P55036 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.55■□□□□ 0.72
PSMD4P55036 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PSMD4P55036 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PSMD4P55036 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PSMD4P55036 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.55■□□□□ 0.72
PSMD4P55036 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.55■□□□□ 0.72
PSMD4P55036 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.55■□□□□ 0.72
PSMD4P55036 Z98882.1-201ENST00000622160 2253 ntBASIC19.55■□□□□ 0.72
PSMD4P55036 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.55■□□□□ 0.72
PSMD4P55036 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.55■□□□□ 0.72
PSMD4P55036 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PSMD4P55036 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PSMD4P55036 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PSMD4P55036 KRT87P-202ENST00000534226 1464 ntBASIC19.54■□□□□ 0.72
PSMD4P55036 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PSMD4P55036 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PSMD4P55036 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.54■□□□□ 0.72
PSMD4P55036 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PSMD4P55036 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PSMD4P55036 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PSMD4P55036 TERF1P2-201ENST00000583350 1212 ntBASIC19.54■□□□□ 0.72
PSMD4P55036 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.54■□□□□ 0.72
PSMD4P55036 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PSMD4P55036 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.54■□□□□ 0.72
PSMD4P55036 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms