Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.82■■□□□ 1.08
PTPN5P54829 AL359736.2-201ENST00000621992 437 ntBASIC21.82■■□□□ 1.08
PTPN5P54829 AC087742.1-201ENST00000575880 1738 ntBASIC21.82■■□□□ 1.08
PTPN5P54829 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN5P54829 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN5P54829 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PTPN5P54829 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN5P54829 C1orf229-201ENST00000623686 2258 ntBASIC21.81■■□□□ 1.08
PTPN5P54829 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
PTPN5P54829 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN5P54829 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN5P54829 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.81■■□□□ 1.08
PTPN5P54829 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.81■■□□□ 1.08
PTPN5P54829 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.81■■□□□ 1.08
PTPN5P54829 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.81■■□□□ 1.08
PTPN5P54829 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN5P54829 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN5P54829 AC127496.7-201ENST00000625110 1798 ntBASIC21.81■■□□□ 1.08
PTPN5P54829 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PTPN5P54829 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.8■■□□□ 1.08
PTPN5P54829 AC068338.2-201ENST00000563278 1430 ntBASIC21.8■■□□□ 1.08
PTPN5P54829 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.8■■□□□ 1.08
PTPN5P54829 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.8■■□□□ 1.08
PTPN5P54829 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PTPN5P54829 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.8■■□□□ 1.08
PTPN5P54829 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PTPN5P54829 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PTPN5P54829 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PTPN5P54829 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PTPN5P54829 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.8■■□□□ 1.08
PTPN5P54829 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN5P54829 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.79■■□□□ 1.08
PTPN5P54829 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PTPN5P54829 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.79■■□□□ 1.08
PTPN5P54829 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN5P54829 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN5P54829 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN5P54829 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN5P54829 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
PTPN5P54829 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.79■■□□□ 1.08
PTPN5P54829 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN5P54829 AP003097.1-201ENST00000530657 1135 ntBASIC21.79■■□□□ 1.08
PTPN5P54829 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.79■■□□□ 1.08
PTPN5P54829 KRT18P20-201ENST00000548986 1279 ntBASIC21.79■■□□□ 1.08
PTPN5P54829 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN5P54829 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN5P54829 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN5P54829 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.79■■□□□ 1.08
PTPN5P54829 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.79■■□□□ 1.08
PTPN5P54829 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN5P54829 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN5P54829 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN5P54829 AC005224.4-201ENST00000583262 1652 ntBASIC21.79■■□□□ 1.08
PTPN5P54829 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN5P54829 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN5P54829 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PTPN5P54829 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN5P54829 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.78■■□□□ 1.08
PTPN5P54829 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.78■■□□□ 1.08
PTPN5P54829 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN5P54829 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.78■■□□□ 1.08
PTPN5P54829 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.78■■□□□ 1.08
PTPN5P54829 AC069236.1-201ENST00000604339 616 ntBASIC21.78■■□□□ 1.08
PTPN5P54829 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN5P54829 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN5P54829 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN5P54829 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN5P54829 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN5P54829 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.78■■□□□ 1.08
PTPN5P54829 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.78■■□□□ 1.08
PTPN5P54829 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN5P54829 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN5P54829 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN5P54829 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.77■■□□□ 1.08
PTPN5P54829 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN5P54829 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PTPN5P54829 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN5P54829 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PTPN5P54829 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.77■■□□□ 1.08
PTPN5P54829 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN5P54829 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN5P54829 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.77■■□□□ 1.08
PTPN5P54829 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.77■■□□□ 1.08
PTPN5P54829 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN5P54829 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN5P54829 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms