Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.71■■□□□ 1.07
PMS2P54278 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS2P54278 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PMS2P54278 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS2P54278 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS2P54278 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS2P54278 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PMS2P54278 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS2P54278 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS2P54278 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
PMS2P54278 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
PMS2P54278 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
PMS2P54278 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMS2P54278 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PMS2P54278 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMS2P54278 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.7■■□□□ 1.06
PMS2P54278 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.7■■□□□ 1.06
PMS2P54278 AC106739.1-201ENST00000617035 715 ntBASIC21.7■■□□□ 1.06
PMS2P54278 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.7■■□□□ 1.06
PMS2P54278 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.7■■□□□ 1.06
PMS2P54278 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMS2P54278 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMS2P54278 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.7■■□□□ 1.06
PMS2P54278 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS2P54278 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS2P54278 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS2P54278 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.69■■□□□ 1.06
PMS2P54278 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS2P54278 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS2P54278 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.69■■□□□ 1.06
PMS2P54278 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.69■■□□□ 1.06
PMS2P54278 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.69■■□□□ 1.06
PMS2P54278 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.69■■□□□ 1.06
PMS2P54278 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.69■■□□□ 1.06
PMS2P54278 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS2P54278 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS2P54278 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PMS2P54278 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PMS2P54278 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS2P54278 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PMS2P54278 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS2P54278 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PMS2P54278 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
PMS2P54278 PBX2P1-201ENST00000493219 1291 ntBASIC21.68■■□□□ 1.06
PMS2P54278 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PMS2P54278 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.68■■□□□ 1.06
PMS2P54278 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PMS2P54278 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMS2P54278 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PMS2P54278 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMS2P54278 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMS2P54278 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.67■■□□□ 1.06
PMS2P54278 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMS2P54278 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMS2P54278 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMS2P54278 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMS2P54278 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.67■■□□□ 1.06
PMS2P54278 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.67■■□□□ 1.06
PMS2P54278 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PMS2P54278 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMS2P54278 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PMS2P54278 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PMS2P54278 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PMS2P54278 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMS2P54278 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PMS2P54278 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS2P54278 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS2P54278 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS2P54278 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.66■■□□□ 1.06
PMS2P54278 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS2P54278 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS2P54278 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.66■■□□□ 1.06
PMS2P54278 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PMS2P54278 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.66■■□□□ 1.06
PMS2P54278 AC241377.3-202ENST00000626088 1088 ntBASIC21.66■■□□□ 1.06
PMS2P54278 AC241585.3-202ENST00000628937 1088 ntBASIC21.66■■□□□ 1.06
PMS2P54278 AC245100.8-202ENST00000629247 1058 ntBASIC21.66■■□□□ 1.06
PMS2P54278 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS2P54278 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS2P54278 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS2P54278 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PMS2P54278 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.66■■□□□ 1.06
PMS2P54278 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
PMS2P54278 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
PMS2P54278 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PMS2P54278 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PMS2P54278 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PMS2P54278 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 GABARAPL3-202ENST00000624044 1851 ntBASIC21.65■■□□□ 1.06
PMS2P54278 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PMS2P54278 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.65■■□□□ 1.06
PMS2P54278 AC142381.2-201ENST00000566120 298 ntBASIC21.65■■□□□ 1.06
PMS2P54278 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms