Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCR9P51686 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCR9P51686 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCR9P51686 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCR9P51686 SYT6-210ENST00000641643 1587 ntBASIC18.51■□□□□ 0.55
CCR9P51686 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCR9P51686 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCR9P51686 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CCR9P51686 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.51■□□□□ 0.55
CCR9P51686 SERBP1P1-201ENST00000396021 1160 ntBASIC18.51■□□□□ 0.55
CCR9P51686 AC011298.3-201ENST00000615796 283 ntBASIC18.51■□□□□ 0.55
CCR9P51686 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCR9P51686 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCR9P51686 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCR9P51686 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCR9P51686 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCR9P51686 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCR9P51686 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCR9P51686 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCR9P51686 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCR9P51686 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCR9P51686 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.5■□□□□ 0.55
CCR9P51686 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCR9P51686 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCR9P51686 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.5■□□□□ 0.55
CCR9P51686 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.5■□□□□ 0.55
CCR9P51686 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.5■□□□□ 0.55
CCR9P51686 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCR9P51686 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCR9P51686 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCR9P51686 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.5■□□□□ 0.55
CCR9P51686 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCR9P51686 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CCR9P51686 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCR9P51686 AP006587.3-201ENST00000525742 1516 ntBASIC18.49■□□□□ 0.55
CCR9P51686 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCR9P51686 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCR9P51686 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCR9P51686 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCR9P51686 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.49■□□□□ 0.55
CCR9P51686 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.49■□□□□ 0.55
CCR9P51686 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCR9P51686 LINC01006-201ENST00000333319 2292 ntBASIC18.49■□□□□ 0.55
CCR9P51686 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCR9P51686 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.49■□□□□ 0.55
CCR9P51686 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CCR9P51686 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCR9P51686 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.49■□□□□ 0.55
CCR9P51686 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCR9P51686 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCR9P51686 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CCR9P51686 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCR9P51686 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCR9P51686 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.48■□□□□ 0.55
CCR9P51686 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
CCR9P51686 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCR9P51686 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCR9P51686 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCR9P51686 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCR9P51686 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCR9P51686 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCR9P51686 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCR9P51686 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.48■□□□□ 0.55
CCR9P51686 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCR9P51686 AC007952.6-201ENST00000573168 2673 ntBASIC18.47■□□□□ 0.55
CCR9P51686 AC003957.1-201ENST00000625108 2673 ntBASIC18.47■□□□□ 0.55
CCR9P51686 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCR9P51686 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.47■□□□□ 0.55
CCR9P51686 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.47■□□□□ 0.55
CCR9P51686 SLC47A1P1-202ENST00000449666 945 ntBASIC18.47■□□□□ 0.55
CCR9P51686 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.47■□□□□ 0.55
CCR9P51686 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.47■□□□□ 0.55
CCR9P51686 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCR9P51686 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CCR9P51686 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.47■□□□□ 0.55
CCR9P51686 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCR9P51686 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
CCR9P51686 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCR9P51686 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCR9P51686 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.46■□□□□ 0.55
CCR9P51686 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.46■□□□□ 0.55
CCR9P51686 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.46■□□□□ 0.55
CCR9P51686 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.46■□□□□ 0.55
CCR9P51686 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms