Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF144AP50876 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RNF144AP50876 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF144AP50876 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF144AP50876 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RNF144AP50876 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF144AP50876 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF144AP50876 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF144AP50876 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF144AP50876 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 AC005224.4-201ENST00000583262 1652 ntBASIC19.54■□□□□ 0.72
RNF144AP50876 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF144AP50876 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF144AP50876 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF144AP50876 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF144AP50876 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF144AP50876 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RNF144AP50876 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF144AP50876 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF144AP50876 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF144AP50876 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RNF144AP50876 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF144AP50876 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF144AP50876 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF144AP50876 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF144AP50876 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF144AP50876 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF144AP50876 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF144AP50876 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF144AP50876 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RNF144AP50876 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF144AP50876 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF144AP50876 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF144AP50876 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF144AP50876 AC055733.4-201ENST00000638462 1354 ntBASIC19.52■□□□□ 0.72
RNF144AP50876 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
RNF144AP50876 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.51■□□□□ 0.71
RNF144AP50876 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF144AP50876 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF144AP50876 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF144AP50876 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RNF144AP50876 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RNF144AP50876 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF144AP50876 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF144AP50876 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF144AP50876 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF144AP50876 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF144AP50876 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF144AP50876 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF144AP50876 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF144AP50876 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF144AP50876 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RNF144AP50876 AC009237.3-201ENST00000393279 1427 ntBASIC19.51■□□□□ 0.71
RNF144AP50876 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RNF144AP50876 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF144AP50876 FEM1AP4-201ENST00000443167 1987 ntBASIC19.5■□□□□ 0.71
RNF144AP50876 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF144AP50876 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF144AP50876 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF144AP50876 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RNF144AP50876 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RNF144AP50876 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF144AP50876 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF144AP50876 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF144AP50876 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF144AP50876 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
RNF144AP50876 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF144AP50876 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.5■□□□□ 0.71
RNF144AP50876 AL354811.1-201ENST00000610286 706 ntBASIC19.5■□□□□ 0.71
RNF144AP50876 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RNF144AP50876 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF144AP50876 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF144AP50876 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RNF144AP50876 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RNF144AP50876 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF144AP50876 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF144AP50876 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF144AP50876 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF144AP50876 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF144AP50876 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF144AP50876 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.49■□□□□ 0.71
RNF144AP50876 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF144AP50876 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF144AP50876 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF144AP50876 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF144AP50876 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF144AP50876 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms