Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.7■□□□□ 0.9
KCNC1P48547 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KCNC1P48547 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNC1P48547 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNC1P48547 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNC1P48547 SUDS3P1-201ENST00000505831 966 ntBASIC20.7■□□□□ 0.9
KCNC1P48547 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.7■□□□□ 0.9
KCNC1P48547 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.7■□□□□ 0.9
KCNC1P48547 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNC1P48547 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNC1P48547 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KCNC1P48547 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KCNC1P48547 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.7■□□□□ 0.9
KCNC1P48547 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNC1P48547 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KCNC1P48547 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
KCNC1P48547 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNC1P48547 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNC1P48547 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.69■□□□□ 0.9
KCNC1P48547 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNC1P48547 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNC1P48547 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNC1P48547 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNC1P48547 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KCNC1P48547 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNC1P48547 MIR572-201ENST00000384983 95 ntBASIC20.69■□□□□ 0.9
KCNC1P48547 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.69■□□□□ 0.9
KCNC1P48547 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNC1P48547 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNC1P48547 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KCNC1P48547 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNC1P48547 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNC1P48547 BX005040.4-201ENST00000637145 1518 ntBASIC20.68■□□□□ 0.9
KCNC1P48547 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.68■□□□□ 0.9
KCNC1P48547 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNC1P48547 AC005224.4-201ENST00000583262 1652 ntBASIC20.68■□□□□ 0.9
KCNC1P48547 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNC1P48547 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.68■□□□□ 0.9
KCNC1P48547 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
KCNC1P48547 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.68■□□□□ 0.9
KCNC1P48547 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNC1P48547 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.68■□□□□ 0.9
KCNC1P48547 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KCNC1P48547 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNC1P48547 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KCNC1P48547 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNC1P48547 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNC1P48547 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNC1P48547 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNC1P48547 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.67■□□□□ 0.9
KCNC1P48547 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.67■□□□□ 0.9
KCNC1P48547 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNC1P48547 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KCNC1P48547 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.67■□□□□ 0.9
KCNC1P48547 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNC1P48547 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.67■□□□□ 0.9
KCNC1P48547 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.67■□□□□ 0.9
KCNC1P48547 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.67■□□□□ 0.9
KCNC1P48547 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KCNC1P48547 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNC1P48547 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNC1P48547 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNC1P48547 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNC1P48547 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
KCNC1P48547 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNC1P48547 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNC1P48547 AC091305.1-201ENST00000479476 895 ntBASIC20.66■□□□□ 0.9
KCNC1P48547 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.66■□□□□ 0.9
KCNC1P48547 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNC1P48547 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KCNC1P48547 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.66■□□□□ 0.9
KCNC1P48547 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.66■□□□□ 0.9
KCNC1P48547 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNC1P48547 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCNC1P48547 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
KCNC1P48547 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNC1P48547 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNC1P48547 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNC1P48547 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNC1P48547 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNC1P48547 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNC1P48547 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
KCNC1P48547 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNC1P48547 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.65■□□□□ 0.9
KCNC1P48547 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.64■□□□□ 0.9
KCNC1P48547 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KCNC1P48547 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCNC1P48547 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms