Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPHP41219 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPHP41219 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPHP41219 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PRPHP41219 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
PRPHP41219 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PRPHP41219 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPHP41219 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PRPHP41219 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPHP41219 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PRPHP41219 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPHP41219 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PRPHP41219 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPHP41219 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRPHP41219 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PRPHP41219 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PRPHP41219 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.83■■□□□ 1.41
PRPHP41219 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRPHP41219 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRPHP41219 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.83■■□□□ 1.41
PRPHP41219 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PRPHP41219 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PRPHP41219 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.83■■□□□ 1.41
PRPHP41219 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.83■■□□□ 1.41
PRPHP41219 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PRPHP41219 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
PRPHP41219 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.83■■□□□ 1.4
PRPHP41219 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PRPHP41219 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PRPHP41219 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPHP41219 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPHP41219 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.82■■□□□ 1.4
PRPHP41219 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.82■■□□□ 1.4
PRPHP41219 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPHP41219 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.82■■□□□ 1.4
PRPHP41219 KRT18P14-201ENST00000534205 1250 ntBASIC23.82■■□□□ 1.4
PRPHP41219 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.82■■□□□ 1.4
PRPHP41219 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPHP41219 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPHP41219 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPHP41219 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPHP41219 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPHP41219 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PRPHP41219 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRPHP41219 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.81■■□□□ 1.4
PRPHP41219 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRPHP41219 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
PRPHP41219 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.81■■□□□ 1.4
PRPHP41219 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRPHP41219 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.81■■□□□ 1.4
PRPHP41219 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.81■■□□□ 1.4
PRPHP41219 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRPHP41219 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.81■■□□□ 1.4
PRPHP41219 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.81■■□□□ 1.4
PRPHP41219 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.81■■□□□ 1.4
PRPHP41219 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PRPHP41219 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PRPHP41219 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRPHP41219 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRPHP41219 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRPHP41219 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRPHP41219 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRPHP41219 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRPHP41219 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PRPHP41219 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PRPHP41219 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PRPHP41219 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.8■■□□□ 1.4
PRPHP41219 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PRPHP41219 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRPHP41219 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRPHP41219 AL024507.2-201ENST00000606070 2574 ntBASIC23.8■■□□□ 1.4
PRPHP41219 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.8■■□□□ 1.4
PRPHP41219 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRPHP41219 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRPHP41219 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PRPHP41219 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PRPHP41219 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PRPHP41219 AC138907.5-202ENST00000569484 235 ntBASIC23.79■■□□□ 1.4
PRPHP41219 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRPHP41219 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PRPHP41219 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PRPHP41219 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRPHP41219 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.78■■□□□ 1.4
PRPHP41219 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.78■■□□□ 1.4
PRPHP41219 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.78■■□□□ 1.4
PRPHP41219 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.78■■□□□ 1.4
PRPHP41219 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPHP41219 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.78■■□□□ 1.4
PRPHP41219 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.78■■□□□ 1.4
PRPHP41219 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.78■■□□□ 1.4
PRPHP41219 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PRPHP41219 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PRPHP41219 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPHP41219 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.78■■□□□ 1.4
PRPHP41219 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
PRPHP41219 AC097381.1-201ENST00000429019 1296 ntBASIC23.77■■□□□ 1.4
PRPHP41219 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.77■■□□□ 1.4
PRPHP41219 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRPHP41219 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.77■■□□□ 1.4
PRPHP41219 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms