Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 GLG2YJL137C 1143 nt2.96□□□□□ -1.94
RTR1P40084 YKR070WYKR070W 1059 nt2.96□□□□□ -1.94
RTR1P40084 REX3YLR107W 1215 nt2.96□□□□□ -1.94
RTR1P40084 MRPS17YMR188C 714 nt2.96□□□□□ -1.94
RTR1P40084 VPS28YPL065W 729 nt2.96□□□□□ -1.94
RTR1P40084 PDC2YDR081C 2778 nt2.96□□□□□ -1.94
RTR1P40084 PUF6YDR496C 1971 nt2.96□□□□□ -1.94
RTR1P40084 APL5YPL195W 2799 nt2.95□□□□□ -1.94
RTR1P40084 MTL1YGR023W 1656 nt2.95□□□□□ -1.94
RTR1P40084 MMS21YEL019C 804 nt2.95□□□□□ -1.94
RTR1P40084 ERG25YGR060W 930 nt2.95□□□□□ -1.94
RTR1P40084 EMC2YJR088C 879 nt2.95□□□□□ -1.94
RTR1P40084 BET3YKR068C 582 nt2.95□□□□□ -1.94
RTR1P40084 YNL109WYNL109W 546 nt2.95□□□□□ -1.94
RTR1P40084 STE24YJR117W 1362 nt2.95□□□□□ -1.94
RTR1P40084 SCD5YOR329C 2619 nt2.95□□□□□ -1.94
RTR1P40084 HUL5YGL141W 2733 nt2.94□□□□□ -1.94
RTR1P40084 KIN82YCR091W 2163 nt2.94□□□□□ -1.94
RTR1P40084 HFM1YGL251C 3564 nt2.94□□□□□ -1.94
RTR1P40084 TAO3YIL129C 7131 nt2.94□□□□□ -1.94
RTR1P40084 SVL3YPL032C 2478 nt2.94□□□□□ -1.94
RTR1P40084 YPR1YDR368W 939 nt2.94□□□□□ -1.94
RTR1P40084 PTI1YGR156W 1278 nt2.94□□□□□ -1.94
RTR1P40084 AIM32YML050W 936 nt2.94□□□□□ -1.94
RTR1P40084 YET2YMR040W 483 nt2.94□□□□□ -1.94
RTR1P40084 YMR187CYMR187C 1296 nt2.94□□□□□ -1.94
RTR1P40084 YOL050CYOL050C 321 nt2.94□□□□□ -1.94
RTR1P40084 SUR1YPL057C 1149 nt2.94□□□□□ -1.94
RTR1P40084 RIX1YHR197W 2292 nt2.94□□□□□ -1.94
RTR1P40084 TAF2YCR042C 4224 nt2.94□□□□□ -1.94
RTR1P40084 PSK1YAL017W 4071 nt2.93□□□□□ -1.94
RTR1P40084 ESC1YMR219W 4977 nt2.93□□□□□ -1.94
RTR1P40084 AIM11YER093C-A 414 nt2.93□□□□□ -1.94
RTR1P40084 LSM12YHR121W 564 nt2.93□□□□□ -1.94
RTR1P40084 MST28YAR033W 705 nt2.93□□□□□ -1.94
RTR1P40084 PFY1YOR122C 381 nt2.93□□□□□ -1.94
RTR1P40084 DSE3YOR264W 1293 nt2.93□□□□□ -1.94
RTR1P40084 YPR078CYPR078C 1119 nt2.93□□□□□ -1.94
RTR1P40084 DSS1YMR287C 2910 nt2.93□□□□□ -1.94
RTR1P40084 UBP1YDL122W 2430 nt2.93□□□□□ -1.94
RTR1P40084 BNR1YIL159W 4128 nt2.92□□□□□ -1.94
RTR1P40084 THO1YER063W 657 nt2.92□□□□□ -1.94
RTR1P40084 SNX4YJL036W 1272 nt2.92□□□□□ -1.94
RTR1P40084 YLR444CYLR444C 303 nt2.92□□□□□ -1.94
RTR1P40084 MNT3YIL014W 1893 nt2.92□□□□□ -1.94
RTR1P40084 FRE2YKL220C 2136 nt2.92□□□□□ -1.94
RTR1P40084 DIA2YOR080W 2199 nt2.91□□□□□ -1.94
RTR1P40084 MIX14YDR031W 366 nt2.91□□□□□ -1.94
RTR1P40084 EFG1YGR271C-A 702 nt2.91□□□□□ -1.94
RTR1P40084 YLL037WYLL037W 381 nt2.91□□□□□ -1.94
RTR1P40084 SSU72YNL222W 621 nt2.91□□□□□ -1.94
RTR1P40084 ARO7YPR060C 771 nt2.91□□□□□ -1.94
RTR1P40084 YML096WYML096W 1578 nt2.91□□□□□ -1.94
RTR1P40084 RSN1YMR266W 2862 nt2.9□□□□□ -1.94
RTR1P40084 SAP1YER047C 2694 nt2.9□□□□□ -1.94
RTR1P40084 YCG1YDR325W 3108 nt2.9□□□□□ -1.95
RTR1P40084 YGR039WYGR039W 312 nt2.9□□□□□ -1.95
RTR1P40084 EPT1YHR123W 1176 nt2.9□□□□□ -1.95
RTR1P40084 KRE2YDR483W 1329 nt2.9□□□□□ -1.95
RTR1P40084 GUP1YGL084C 1683 nt2.89□□□□□ -1.95
RTR1P40084 PMI40YER003C 1290 nt2.89□□□□□ -1.95
RTR1P40084 VTC1YER072W 390 nt2.89□□□□□ -1.95
RTR1P40084 NDL1YLR254C 570 nt2.89□□□□□ -1.95
RTR1P40084 GLO1YML004C 981 nt2.89□□□□□ -1.95
RTR1P40084 SAS2YMR127C 1017 nt2.89□□□□□ -1.95
RTR1P40084 GYL1YMR192W 2163 nt2.89□□□□□ -1.95
RTR1P40084 AAR2YBL074C 1068 nt2.89□□□□□ -1.95
RTR1P40084 YBL094CYBL094C 333 nt2.89□□□□□ -1.95
RTR1P40084 SYC1YOR179C 567 nt2.89□□□□□ -1.95
RTR1P40084 MRP2YPR166C 348 nt2.89□□□□□ -1.95
RTR1P40084 YBR300CYBR300C 498 nt2.89□□□□□ -1.95
RTR1P40084 SOK1YDR006C 2706 nt2.89□□□□□ -1.95
RTR1P40084 ECM18YDR125C 1362 nt2.88□□□□□ -1.95
RTR1P40084 ARF1YDL192W 546 nt2.88□□□□□ -1.95
RTR1P40084 MCM21YDR318W 1107 nt2.88□□□□□ -1.95
RTR1P40084 LRS4YDR439W 1044 nt2.88□□□□□ -1.95
RTR1P40084 VEL1YGL258W 621 nt2.88□□□□□ -1.95
RTR1P40084 YAL037WYAL037W 804 nt2.88□□□□□ -1.95
RTR1P40084 YKL156C-AYKL156C-A 117 nt2.88□□□□□ -1.95
RTR1P40084 YBL055CYBL055C 1257 nt2.88□□□□□ -1.95
RTR1P40084 YOR062CYOR062C 807 nt2.88□□□□□ -1.95
RTR1P40084 YPR027CYPR027C 834 nt2.88□□□□□ -1.95
RTR1P40084 RFC5YBR087W 1065 nt2.88□□□□□ -1.95
RTR1P40084 VPS13YLL040C 9435 nt2.88□□□□□ -1.95
RTR1P40084 PCL2YDL127W 927 nt2.87□□□□□ -1.95
RTR1P40084 HTA1YDR225W 399 nt2.87□□□□□ -1.95
RTR1P40084 YGR204C-AYGR204C-A 114 nt2.87□□□□□ -1.95
RTR1P40084 RAD10YML095C 633 nt2.87□□□□□ -1.95
RTR1P40084 PFK27YOL136C 1194 nt2.87□□□□□ -1.95
RTR1P40084 NDT80YHR124W 1884 nt2.87□□□□□ -1.95
RTR1P40084 TPO5YKL174C 1857 nt2.87□□□□□ -1.95
RTR1P40084 YEF3YLR249W 3135 nt2.87□□□□□ -1.95
RTR1P40084 CLN3YAL040C 1743 nt2.86□□□□□ -1.95
RTR1P40084 MED1YPR070W 1701 nt2.86□□□□□ -1.95
RTR1P40084 YER147C-AYER147C-A 411 nt2.86□□□□□ -1.95
RTR1P40084 YHR086W-AYHR086W-A 162 nt2.86□□□□□ -1.95
RTR1P40084 REC102YLR329W 795 nt2.86□□□□□ -1.95
RTR1P40084 UTP15YMR093W 1542 nt2.86□□□□□ -1.95
RTR1P40084 RED1YLR263W 2484 nt2.86□□□□□ -1.95
RTR1P40084 KAP104YBR017C 2757 nt2.86□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 10.4 ms