Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 MDM36YPR083W 1740 nt5.09□□□□□ -1.59
SSF1P38789 PHR1YOR386W 1698 nt5.09□□□□□ -1.59
SSF1P38789 RAD52YML032C 1416 nt5.09□□□□□ -1.59
SSF1P38789 YNL284C-AYNL284C-A 1323 nt5.09□□□□□ -1.59
SSF1P38789 TRM11YOL124C 1302 nt5.09□□□□□ -1.59
SSF1P38789 API2YDR525W 330 nt5.09□□□□□ -1.59
SSF1P38789 YFL015CYFL015C 495 nt5.09□□□□□ -1.59
SSF1P38789 SOP4YJL192C 705 nt5.09□□□□□ -1.59
SSF1P38789 YML031C-AYML031C-A 336 nt5.09□□□□□ -1.59
SSF1P38789 YMR052C-AYMR052C-A 366 nt5.09□□□□□ -1.59
SSF1P38789 RPL18BYNL301C 561 nt5.09□□□□□ -1.59
SSF1P38789 CYM1YDR430C 2970 nt5.09□□□□□ -1.6
SSF1P38789 EXO70YJL085W 1872 nt5.09□□□□□ -1.6
SSF1P38789 RSC58YLR033W 1509 nt5.08□□□□□ -1.6
SSF1P38789 PPH3YDR075W 927 nt5.08□□□□□ -1.6
SSF1P38789 YJL119CYJL119C 324 nt5.08□□□□□ -1.6
SSF1P38789 VPS51YKR020W 495 nt5.08□□□□□ -1.6
SSF1P38789 YNL150WYNL150W 408 nt5.08□□□□□ -1.6
SSF1P38789 EBS1YDR206W 2655 nt5.08□□□□□ -1.6
SSF1P38789 FLO8YER109C 2400 nt5.07□□□□□ -1.6
SSF1P38789 MSK1YNL073W 1731 nt5.07□□□□□ -1.6
SSF1P38789 YER034WYER034W 558 nt5.07□□□□□ -1.6
SSF1P38789 YGR161W-CYGR161W-C 279 nt5.07□□□□□ -1.6
SSF1P38789 RPS4BYHR203C 786 nt5.07□□□□□ -1.6
SSF1P38789 EFB1YAL003W 621 nt5.07□□□□□ -1.6
SSF1P38789 YJR037WYJR037W 384 nt5.07□□□□□ -1.6
SSF1P38789 RPA12YJR063W 378 nt5.07□□□□□ -1.6
SSF1P38789 IGO1YNL157W 507 nt5.07□□□□□ -1.6
SSF1P38789 VAM10YOR068C 345 nt5.07□□□□□ -1.6
SSF1P38789 SPC105YGL093W 2754 nt5.07□□□□□ -1.6
SSF1P38789 ITT1YML068W 1395 nt5.06□□□□□ -1.6
SSF1P38789 AIM21YIR003W 2040 nt5.06□□□□□ -1.6
SSF1P38789 TPA1YER049W 1935 nt5.06□□□□□ -1.6
SSF1P38789 YER046W-AYER046W-A 330 nt5.06□□□□□ -1.6
SSF1P38789 BUD13YGL174W 801 nt5.06□□□□□ -1.6
SSF1P38789 UPF3YGR072W 1164 nt5.06□□□□□ -1.6
SSF1P38789 YIL021C-AYIL021C-A 270 nt5.06□□□□□ -1.6
SSF1P38789 DPH1YIL103W 1278 nt5.06□□□□□ -1.6
SSF1P38789 IDP2YLR174W 1239 nt5.06□□□□□ -1.6
SSF1P38789 YNR034W-AYNR034W-A 297 nt5.06□□□□□ -1.6
SSF1P38789 INO4YOL108C 456 nt5.06□□□□□ -1.6
SSF1P38789 PEP5YMR231W 3090 nt5.05□□□□□ -1.6
SSF1P38789 VPS30YPL120W 1674 nt5.05□□□□□ -1.6
SSF1P38789 YCR045W-AYCR045W-A 351 nt5.05□□□□□ -1.6
SSF1P38789 YDL032WYDL032W 312 nt5.05□□□□□ -1.6
SSF1P38789 FAD1YDL045C 921 nt5.05□□□□□ -1.6
SSF1P38789 PUG1YER185W 912 nt5.05□□□□□ -1.6
SSF1P38789 RPL9AYGL147C 576 nt5.05□□□□□ -1.6
SSF1P38789 BRR6YGL247W 594 nt5.05□□□□□ -1.6
SSF1P38789 YGR018CYGR018C 330 nt5.05□□□□□ -1.6
SSF1P38789 tQ(UUG)CtQ(UUG)C 72 nt5.05□□□□□ -1.6
SSF1P38789 tQ(UUG)D1tQ(UUG)D1 72 nt5.05□□□□□ -1.6
SSF1P38789 tQ(UUG)D2tQ(UUG)D2 72 nt5.05□□□□□ -1.6
SSF1P38789 tQ(UUG)D3tQ(UUG)D3 72 nt5.05□□□□□ -1.6
SSF1P38789 tQ(UUG)E1tQ(UUG)E1 72 nt5.05□□□□□ -1.6
SSF1P38789 tQ(UUG)HtQ(UUG)H 72 nt5.05□□□□□ -1.6
SSF1P38789 tQ(UUG)LtQ(UUG)L 72 nt5.05□□□□□ -1.6
SSF1P38789 NFU1YKL040C 771 nt5.05□□□□□ -1.6
SSF1P38789 RAD27YKL113C 1149 nt5.05□□□□□ -1.6
SSF1P38789 YKE2YLR200W 345 nt5.05□□□□□ -1.6
SSF1P38789 IMP1YMR150C 573 nt5.05□□□□□ -1.6
SSF1P38789 GRE2YOL151W 1029 nt5.05□□□□□ -1.6
SSF1P38789 DIT2YDR402C 1470 nt5.05□□□□□ -1.6
SSF1P38789 RPN3YER021W 1572 nt5.04□□□□□ -1.6
SSF1P38789 SLK19YOR195W 2466 nt5.04□□□□□ -1.6
SSF1P38789 TRM44YPL030W 1704 nt5.04□□□□□ -1.6
SSF1P38789 TMA17YDL110C 453 nt5.04□□□□□ -1.6
SSF1P38789 YDR114CYDR114C 303 nt5.04□□□□□ -1.6
SSF1P38789 BI2Q0110 1272 nt5.04□□□□□ -1.6
SSF1P38789 OTU1YFL044C 906 nt5.04□□□□□ -1.6
SSF1P38789 RSR1YGR152C 819 nt5.04□□□□□ -1.6
SSF1P38789 YIL171WYIL171W 330 nt5.04□□□□□ -1.6
SSF1P38789 YIR020C-BYIR020C-B 735 nt5.04□□□□□ -1.6
SSF1P38789 ASG7YJL170C 630 nt5.04□□□□□ -1.6
SSF1P38789 RPB5YBR154C 648 nt5.04□□□□□ -1.6
SSF1P38789 FRM2YCL026C-A 582 nt5.04□□□□□ -1.6
SSF1P38789 PEX29YDR479C 1665 nt5.04□□□□□ -1.6
SSF1P38789 APC5YOR249C 2058 nt5.04□□□□□ -1.6
SSF1P38789 RIM21YNL294C 1602 nt5.04□□□□□ -1.6
SSF1P38789 CHL1YPL008W 2586 nt5.04□□□□□ -1.6
SSF1P38789 ARP4YJL081C 1470 nt5.03□□□□□ -1.6
SSF1P38789 RPS29BYDL061C 171 nt5.03□□□□□ -1.6
SSF1P38789 PRM8YGL053W 714 nt5.03□□□□□ -1.6
SSF1P38789 YGL088WYGL088W 366 nt5.03□□□□□ -1.6
SSF1P38789 CSE4YKL049C 690 nt5.03□□□□□ -1.6
SSF1P38789 YLR171WYLR171W 390 nt5.03□□□□□ -1.6
SSF1P38789 YLR400WYLR400W 474 nt5.03□□□□□ -1.6
SSF1P38789 YPL088WYPL088W 1029 nt5.03□□□□□ -1.6
SSF1P38789 YPL107WYPL107W 747 nt5.03□□□□□ -1.6
SSF1P38789 LYS2YBR115C 4179 nt5.03□□□□□ -1.6
SSF1P38789 KIN2YLR096W 3444 nt5.03□□□□□ -1.6
SSF1P38789 DIP2YLR129W 2832 nt5.03□□□□□ -1.6
SSF1P38789 VIP1YLR410W 3441 nt5.03□□□□□ -1.6
SSF1P38789 GAL80YML051W 1308 nt5.02□□□□□ -1.61
SSF1P38789 AIM7YDR063W 450 nt5.02□□□□□ -1.61
SSF1P38789 YEL075CYEL075C 369 nt5.02□□□□□ -1.61
SSF1P38789 COX13YGL191W 390 nt5.02□□□□□ -1.61
SSF1P38789 RPL6BYLR448W 531 nt5.02□□□□□ -1.61
SSF1P38789 INN1YNL152W 1230 nt5.02□□□□□ -1.61
SSF1P38789 TEL1YBL088C 8364 nt5.02□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 23.6 ms