Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.03■■□□□ 1.12
SCNN1AP37088 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCNN1AP37088 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SCNN1AP37088 KRT19P1-201ENST00000405746 1186 ntBASIC22.03■■□□□ 1.12
SCNN1AP37088 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SCNN1AP37088 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCNN1AP37088 KRT18P20-201ENST00000548986 1279 ntBASIC22.03■■□□□ 1.12
SCNN1AP37088 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SCNN1AP37088 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SCNN1AP37088 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SCNN1AP37088 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SCNN1AP37088 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SCNN1AP37088 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.03■■□□□ 1.12
SCNN1AP37088 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCNN1AP37088 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCNN1AP37088 AC026310.3-201ENST00000625186 2373 ntBASIC22.03■■□□□ 1.12
SCNN1AP37088 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCNN1AP37088 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCNN1AP37088 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCNN1AP37088 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SCNN1AP37088 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCNN1AP37088 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
SCNN1AP37088 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCNN1AP37088 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCNN1AP37088 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
SCNN1AP37088 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCNN1AP37088 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCNN1AP37088 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.02■■□□□ 1.12
SCNN1AP37088 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
SCNN1AP37088 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.02■■□□□ 1.12
SCNN1AP37088 NTF6G-201ENST00000591094 616 ntBASIC22.02■■□□□ 1.12
SCNN1AP37088 AP001160.3-201ENST00000601484 763 ntBASIC22.02■■□□□ 1.12
SCNN1AP37088 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCNN1AP37088 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SCNN1AP37088 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.02■■□□□ 1.12
SCNN1AP37088 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
SCNN1AP37088 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.02■■□□□ 1.11
SCNN1AP37088 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SCNN1AP37088 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCNN1AP37088 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCNN1AP37088 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SCNN1AP37088 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCNN1AP37088 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCNN1AP37088 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SCNN1AP37088 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SCNN1AP37088 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SCNN1AP37088 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.01■■□□□ 1.11
SCNN1AP37088 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.01■■□□□ 1.11
SCNN1AP37088 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SCNN1AP37088 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SCNN1AP37088 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCNN1AP37088 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22■■□□□ 1.11
SCNN1AP37088 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCNN1AP37088 AC061975.6-201ENST00000579045 1553 ntBASIC22■■□□□ 1.11
SCNN1AP37088 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22■■□□□ 1.11
SCNN1AP37088 KRT16P2-201ENST00000414673 1423 ntBASIC22■■□□□ 1.11
SCNN1AP37088 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCNN1AP37088 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22■■□□□ 1.11
SCNN1AP37088 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22■■□□□ 1.11
SCNN1AP37088 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22■■□□□ 1.11
SCNN1AP37088 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22■■□□□ 1.11
SCNN1AP37088 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22■■□□□ 1.11
SCNN1AP37088 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22■■□□□ 1.11
SCNN1AP37088 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SCNN1AP37088 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCNN1AP37088 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22■■□□□ 1.11
SCNN1AP37088 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCNN1AP37088 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCNN1AP37088 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SCNN1AP37088 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SCNN1AP37088 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.99■■□□□ 1.11
SCNN1AP37088 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SCNN1AP37088 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCNN1AP37088 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCNN1AP37088 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.99■■□□□ 1.11
SCNN1AP37088 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.99■■□□□ 1.11
SCNN1AP37088 MIR5787-201ENST00000611784 55 ntBASIC21.99■■□□□ 1.11
SCNN1AP37088 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCNN1AP37088 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.99■■□□□ 1.11
SCNN1AP37088 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCNN1AP37088 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCNN1AP37088 FEM1AP4-201ENST00000443167 1987 ntBASIC21.99■■□□□ 1.11
SCNN1AP37088 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SCNN1AP37088 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SCNN1AP37088 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCNN1AP37088 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SCNN1AP37088 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.98■■□□□ 1.11
SCNN1AP37088 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.98■■□□□ 1.11
SCNN1AP37088 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.98■■□□□ 1.11
SCNN1AP37088 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCNN1AP37088 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SCNN1AP37088 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.98■■□□□ 1.11
SCNN1AP37088 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SCNN1AP37088 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.98■■□□□ 1.11
SCNN1AP37088 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.98■■□□□ 1.11
SCNN1AP37088 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SCNN1AP37088 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.97■■□□□ 1.11
SCNN1AP37088 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.97■■□□□ 1.11
SCNN1AP37088 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCNN1AP37088 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms