Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YAL056C-AYAL056C-A 351 nt4.45□□□□□ -1.7
PUB1P32588 MIM2YLR099W-A 264 nt4.45□□□□□ -1.7
PUB1P32588 MED11YMR112C 396 nt4.45□□□□□ -1.7
PUB1P32588 VTI1YMR197C 654 nt4.45□□□□□ -1.7
PUB1P32588 RPL18AYOL120C 561 nt4.45□□□□□ -1.7
PUB1P32588 NOP2YNL061W 1857 nt4.45□□□□□ -1.7
PUB1P32588 EXO1YOR033C 2109 nt4.45□□□□□ -1.7
PUB1P32588 THI21YPL258C 1656 nt4.45□□□□□ -1.7
PUB1P32588 GIP1YBR045C 1920 nt4.44□□□□□ -1.7
PUB1P32588 YER079C-AYER079C-A 339 nt4.44□□□□□ -1.7
PUB1P32588 RNR4YGR180C 1038 nt4.44□□□□□ -1.7
PUB1P32588 MPC3YGR243W 441 nt4.44□□□□□ -1.7
PUB1P32588 tR(ACG)JtR(ACG)J 73 nt4.44□□□□□ -1.7
PUB1P32588 VMA10YHR039C-A 345 nt4.44□□□□□ -1.7 RIP-Chip
PUB1P32588 RSM25YIL093C 795 nt4.44□□□□□ -1.7
PUB1P32588 SMA2YML066C 1110 nt4.44□□□□□ -1.7
PUB1P32588 ERP4YOR016C 624 nt4.44□□□□□ -1.7 RIP-Chip
PUB1P32588 DGK1YOR311C 873 nt4.44□□□□□ -1.7 RIP-Chip
PUB1P32588 YOR331CYOR331C 558 nt4.44□□□□□ -1.7
PUB1P32588 PDB1YBR221C 1101 nt4.44□□□□□ -1.7
PUB1P32588 PEP7YDR323C 1548 nt4.44□□□□□ -1.7
PUB1P32588 YBR139WYBR139W 1527 nt4.44□□□□□ -1.7 RIP-Chip
PUB1P32588 NTH1YDR001C 2256 nt4.44□□□□□ -1.7
PUB1P32588 MNT2YGL257C 1677 nt4.44□□□□□ -1.7
PUB1P32588 IMD3YLR432W 1572 nt4.44□□□□□ -1.7
PUB1P32588 CRT10YOL063C 2874 nt4.43□□□□□ -1.7
PUB1P32588 ZPR1YGR211W 1461 nt4.43□□□□□ -1.7
PUB1P32588 RIM21YNL294C 1602 nt4.43□□□□□ -1.7 RIP-Chip
PUB1P32588 KRE6YPR159W 2163 nt4.43□□□□□ -1.7 RIP-Chip
PUB1P32588 CAF4YKR036C 1932 nt4.43□□□□□ -1.7
PUB1P32588 AHC2YCR082W 387 nt4.43□□□□□ -1.7
PUB1P32588 RPL1BYGL135W 654 nt4.43□□□□□ -1.7
PUB1P32588 YGR053CYGR053C 852 nt4.43□□□□□ -1.7
PUB1P32588 REC104YHR157W 549 nt4.43□□□□□ -1.7
PUB1P32588 RPL39YJL189W 156 nt4.43□□□□□ -1.7
PUB1P32588 YML057C-AYML057C-A 390 nt4.43□□□□□ -1.7 RIP-Chip
PUB1P32588 YMR307C-AYMR307C-A 195 nt4.43□□□□□ -1.7
PUB1P32588 YNL338WYNL338W 159 nt4.43□□□□□ -1.7
PUB1P32588 TIM18YOR297C 579 nt4.43□□□□□ -1.7 RIP-Chip
PUB1P32588 RPL1AYPL220W 654 nt4.43□□□□□ -1.7
PUB1P32588 YCL022CYCL022C 516 nt4.43□□□□□ -1.7
PUB1P32588 GNT1YOR320C 1476 nt4.43□□□□□ -1.7
PUB1P32588 SDH7YDR511W 402 nt4.42□□□□□ -1.7
PUB1P32588 NBL1YHR199C-A 222 nt4.42□□□□□ -1.7
PUB1P32588 YKL068W-AYKL068W-A 237 nt4.42□□□□□ -1.7 RIP-Chip
PUB1P32588 YKL107WYKL107W 930 nt4.42□□□□□ -1.7
PUB1P32588 YBL039W-BYBL039W-B 180 nt4.42□□□□□ -1.7
PUB1P32588 ICY1YMR195W 384 nt4.42□□□□□ -1.7
PUB1P32588 YPR077CYPR077C 372 nt4.42□□□□□ -1.7
PUB1P32588 FAP1YNL023C 2898 nt4.42□□□□□ -1.7
PUB1P32588 TUP1YCR084C 2142 nt4.42□□□□□ -1.7 RIP-Chip
PUB1P32588 RVB1YDR190C 1392 nt4.41□□□□□ -1.7
PUB1P32588 FOB1YDR110W 1701 nt4.41□□□□□ -1.7
PUB1P32588 HOM3YER052C 1584 nt4.41□□□□□ -1.7 RIP-Chip
PUB1P32588 HXT5YHR096C 1779 nt4.41□□□□□ -1.7
PUB1P32588 YCR007CYCR007C 720 nt4.41□□□□□ -1.7 RIP-Chip
PUB1P32588 YDL009CYDL009C 324 nt4.41□□□□□ -1.7
PUB1P32588 DPB4YDR121W 591 nt4.41□□□□□ -1.7
PUB1P32588 YGL193CYGL193C 312 nt4.41□□□□□ -1.7 RIP-Chip
PUB1P32588 NSG1YHR133C 876 nt4.41□□□□□ -1.7 RIP-Chip
PUB1P32588 DPH1YIL103W 1278 nt4.41□□□□□ -1.7
PUB1P32588 COX17YLL009C 210 nt4.41□□□□□ -1.7
PUB1P32588 NOP15YNL110C 663 nt4.41□□□□□ -1.7
PUB1P32588 INN1YNL152W 1230 nt4.41□□□□□ -1.7 RIP-Chip
PUB1P32588 NRM1YNR009W 750 nt4.41□□□□□ -1.7 RIP-Chip
PUB1P32588 AVT7YIL088C 1473 nt4.41□□□□□ -1.7
PUB1P32588 YMR102CYMR102C 2505 nt4.41□□□□□ -1.7 RIP-Chip
PUB1P32588 ALE1YOR175C 1860 nt4.41□□□□□ -1.7 RIP-Chip
PUB1P32588 PAN1YIR006C 4443 nt4.41□□□□□ -1.7
PUB1P32588 MSM1YGR171C 1728 nt4.41□□□□□ -1.7
PUB1P32588 YGL152CYGL152C 678 nt4.4□□□□□ -1.71
PUB1P32588 tX(XXX)DtX(XXX)D 100 nt4.4□□□□□ -1.71
PUB1P32588 YPR096CYPR096C 303 nt4.4□□□□□ -1.71
PUB1P32588 PWP1YLR196W 1731 nt4.4□□□□□ -1.71
PUB1P32588 SNF12YNR023W 1701 nt4.4□□□□□ -1.71
PUB1P32588 VAN1YML115C 1608 nt4.39□□□□□ -1.71
PUB1P32588 ALG11YNL048W 1647 nt4.39□□□□□ -1.71
PUB1P32588 YNL095CYNL095C 1929 nt4.39□□□□□ -1.71
PUB1P32588 VAM7YGL212W 951 nt4.39□□□□□ -1.71
PUB1P32588 GOS1YHL031C 672 nt4.39□□□□□ -1.71
PUB1P32588 EMC2YJR088C 879 nt4.39□□□□□ -1.71 RIP-Chip
PUB1P32588 MRPL51YPR100W 423 nt4.39□□□□□ -1.71
PUB1P32588 snR32snR32 188 nt4.39□□□□□ -1.71
PUB1P32588 FRM2YCL026C-A 582 nt4.39□□□□□ -1.71
PUB1P32588 DHR2YKL078W 2208 nt4.39□□□□□ -1.71
PUB1P32588 YPS7YDR349C 1791 nt4.39□□□□□ -1.71
PUB1P32588 CDC36YDL165W 576 nt4.38□□□□□ -1.71
PUB1P32588 BSC2YDR275W 708 nt4.38□□□□□ -1.71 RIP-Chip
PUB1P32588 NTF2YER009W 378 nt4.38□□□□□ -1.71
PUB1P32588 JAC1YGL018C 555 nt4.38□□□□□ -1.71
PUB1P32588 YGR153WYGR153W 654 nt4.38□□□□□ -1.71
PUB1P32588 RPS24BYIL069C 408 nt4.38□□□□□ -1.71 RIP-Chip
PUB1P32588 LSO1YJR005C-A 282 nt4.38□□□□□ -1.71
PUB1P32588 RMI1YPL024W 726 nt4.38□□□□□ -1.71
PUB1P32588 HSP82YPL240C 2130 nt4.38□□□□□ -1.71
PUB1P32588 NHP6AYPR052C 282 nt4.38□□□□□ -1.71 RIP-Chip
PUB1P32588 YCL023CYCL023C 348 nt4.38□□□□□ -1.71
PUB1P32588 IMD2YHR216W 1572 nt4.38□□□□□ -1.71
PUB1P32588 CUE3YGL110C 1875 nt4.38□□□□□ -1.71
PUB1P32588 PPQ1YPL179W 1650 nt4.38□□□□□ -1.71 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms