Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.88■□□□□ 0.61
SDHAP31040 AC055733.4-201ENST00000638462 1354 ntBASIC18.88■□□□□ 0.61
SDHAP31040 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAP31040 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAP31040 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAP31040 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SDHAP31040 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SDHAP31040 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.87■□□□□ 0.61
SDHAP31040 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.87■□□□□ 0.61
SDHAP31040 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.87■□□□□ 0.61
SDHAP31040 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.87■□□□□ 0.61
SDHAP31040 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SDHAP31040 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SDHAP31040 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SDHAP31040 AC005224.4-201ENST00000583262 1652 ntBASIC18.86■□□□□ 0.61
SDHAP31040 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 RASA4CP-201ENST00000424092 1398 ntBASIC18.86■□□□□ 0.61
SDHAP31040 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SDHAP31040 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.86■□□□□ 0.61
SDHAP31040 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.86■□□□□ 0.61
SDHAP31040 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.86■□□□□ 0.61
SDHAP31040 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.86■□□□□ 0.61
SDHAP31040 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SDHAP31040 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.86■□□□□ 0.61
SDHAP31040 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SDHAP31040 BX005040.4-201ENST00000637145 1518 ntBASIC18.85■□□□□ 0.61
SDHAP31040 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.85■□□□□ 0.61
SDHAP31040 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.85■□□□□ 0.61
SDHAP31040 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.85■□□□□ 0.61
SDHAP31040 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.85■□□□□ 0.61
SDHAP31040 MIR572-201ENST00000384983 95 ntBASIC18.85■□□□□ 0.61
SDHAP31040 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.85■□□□□ 0.61
SDHAP31040 MIR939-201ENST00000401314 82 ntBASIC18.85■□□□□ 0.61
SDHAP31040 AC091305.1-201ENST00000479476 895 ntBASIC18.85■□□□□ 0.61
SDHAP31040 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.85■□□□□ 0.61
SDHAP31040 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.85■□□□□ 0.61
SDHAP31040 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.85■□□□□ 0.61
SDHAP31040 AC110285.6-201ENST00000617652 491 ntBASIC18.85■□□□□ 0.61
SDHAP31040 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAP31040 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.85■□□□□ 0.61
SDHAP31040 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAP31040 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SDHAP31040 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SDHAP31040 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SDHAP31040 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SDHAP31040 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.84■□□□□ 0.61
SDHAP31040 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAP31040 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAP31040 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAP31040 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.84■□□□□ 0.61
SDHAP31040 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SDHAP31040 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAP31040 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SDHAP31040 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.84■□□□□ 0.61
SDHAP31040 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAP31040 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAP31040 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SDHAP31040 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAP31040 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAP31040 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAP31040 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAP31040 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SDHAP31040 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.84■□□□□ 0.61
SDHAP31040 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SDHAP31040 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.83■□□□□ 0.61
SDHAP31040 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SDHAP31040 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.83■□□□□ 0.61
SDHAP31040 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.83■□□□□ 0.61
SDHAP31040 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SDHAP31040 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SDHAP31040 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SDHAP31040 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.83■□□□□ 0.6
SDHAP31040 AF213884.3-201ENST00000563833 479 ntBASIC18.83■□□□□ 0.6
SDHAP31040 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.83■□□□□ 0.6
SDHAP31040 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SDHAP31040 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SDHAP31040 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SDHAP31040 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.83■□□□□ 0.6
SDHAP31040 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.83■□□□□ 0.6
SDHAP31040 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SDHAP31040 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SDHAP31040 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SDHAP31040 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SDHAP31040 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.82■□□□□ 0.6
SDHAP31040 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAP31040 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SDHAP31040 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms