Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.22■□□□□ 0.51
CD40P25942 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.22■□□□□ 0.51
CD40P25942 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CD40P25942 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD40P25942 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.22■□□□□ 0.51
CD40P25942 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.22■□□□□ 0.51
CD40P25942 AC061975.6-201ENST00000579045 1553 ntBASIC18.21■□□□□ 0.51
CD40P25942 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD40P25942 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD40P25942 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD40P25942 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD40P25942 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD40P25942 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD40P25942 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CD40P25942 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD40P25942 GPX1P1-201ENST00000388829 606 ntBASIC18.21■□□□□ 0.51
CD40P25942 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD40P25942 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.21■□□□□ 0.51
CD40P25942 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.21■□□□□ 0.51
CD40P25942 AC104771.1-201ENST00000603335 964 ntBASIC18.21■□□□□ 0.51
CD40P25942 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.21■□□□□ 0.51
CD40P25942 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.21■□□□□ 0.51
CD40P25942 AL109923.1-201ENST00000618799 583 ntBASIC18.21■□□□□ 0.51
CD40P25942 AL050303.2-201ENST00000619798 666 ntBASIC18.21■□□□□ 0.51
CD40P25942 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD40P25942 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CD40P25942 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD40P25942 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD40P25942 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.2■□□□□ 0.5
CD40P25942 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD40P25942 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.2■□□□□ 0.5
CD40P25942 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD40P25942 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD40P25942 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.2■□□□□ 0.5
CD40P25942 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.2■□□□□ 0.5
CD40P25942 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD40P25942 AL121832.2-201ENST00000610979 668 ntBASIC18.2■□□□□ 0.5
CD40P25942 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.2■□□□□ 0.5
CD40P25942 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD40P25942 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.2■□□□□ 0.5
CD40P25942 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.2■□□□□ 0.5
CD40P25942 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD40P25942 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD40P25942 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD40P25942 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD40P25942 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.19■□□□□ 0.5
CD40P25942 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD40P25942 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD40P25942 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.19■□□□□ 0.5
CD40P25942 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.19■□□□□ 0.5
CD40P25942 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.19■□□□□ 0.5
CD40P25942 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD40P25942 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CD40P25942 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD40P25942 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD40P25942 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD40P25942 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD40P25942 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.19■□□□□ 0.5
CD40P25942 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD40P25942 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CD40P25942 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CD40P25942 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD40P25942 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD40P25942 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CD40P25942 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.18■□□□□ 0.5
CD40P25942 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.18■□□□□ 0.5
CD40P25942 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.18■□□□□ 0.5
CD40P25942 AC007322.4-201ENST00000509611 723 ntBASIC18.18■□□□□ 0.5
CD40P25942 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.18■□□□□ 0.5
CD40P25942 AC083906.2-201ENST00000511578 360 ntBASIC18.18■□□□□ 0.5
CD40P25942 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.18■□□□□ 0.5
CD40P25942 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.18■□□□□ 0.5
CD40P25942 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CD40P25942 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD40P25942 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD40P25942 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.18■□□□□ 0.5
CD40P25942 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD40P25942 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD40P25942 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.17■□□□□ 0.5
CD40P25942 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD40P25942 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD40P25942 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD40P25942 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.17■□□□□ 0.5
CD40P25942 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD40P25942 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms