Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NR4A1P22736 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR4A1P22736 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NR4A1P22736 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR4A1P22736 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.44■□□□□ 0.7
NR4A1P22736 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.44■□□□□ 0.7
NR4A1P22736 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NR4A1P22736 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.44■□□□□ 0.7
NR4A1P22736 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.44■□□□□ 0.7
NR4A1P22736 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NR4A1P22736 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.44■□□□□ 0.7
NR4A1P22736 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR4A1P22736 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.44■□□□□ 0.7
NR4A1P22736 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.44■□□□□ 0.7
NR4A1P22736 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR4A1P22736 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NR4A1P22736 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 LINC01960-201ENST00000563759 1884 ntBASIC19.43■□□□□ 0.7
NR4A1P22736 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.43■□□□□ 0.7
NR4A1P22736 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 AC092171.4-201ENST00000609130 632 ntBASIC19.43■□□□□ 0.7
NR4A1P22736 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NR4A1P22736 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR4A1P22736 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NR4A1P22736 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
NR4A1P22736 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.43■□□□□ 0.7
NR4A1P22736 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR4A1P22736 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR4A1P22736 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR4A1P22736 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR4A1P22736 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.42■□□□□ 0.7
NR4A1P22736 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR4A1P22736 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.42■□□□□ 0.7
NR4A1P22736 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR4A1P22736 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NR4A1P22736 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NR4A1P22736 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.42■□□□□ 0.7
NR4A1P22736 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.42■□□□□ 0.7
NR4A1P22736 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.42■□□□□ 0.7
NR4A1P22736 AC241377.3-202ENST00000626088 1088 ntBASIC19.42■□□□□ 0.7
NR4A1P22736 AC241585.3-202ENST00000628937 1088 ntBASIC19.42■□□□□ 0.7
NR4A1P22736 AC245100.8-202ENST00000629247 1058 ntBASIC19.42■□□□□ 0.7
NR4A1P22736 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.42■□□□□ 0.7
NR4A1P22736 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.42■□□□□ 0.7
NR4A1P22736 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
NR4A1P22736 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NR4A1P22736 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR4A1P22736 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR4A1P22736 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.42■□□□□ 0.7
NR4A1P22736 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NR4A1P22736 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NR4A1P22736 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NR4A1P22736 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NR4A1P22736 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NR4A1P22736 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR4A1P22736 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR4A1P22736 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NR4A1P22736 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.41■□□□□ 0.7
NR4A1P22736 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.41■□□□□ 0.7
NR4A1P22736 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NR4A1P22736 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NR4A1P22736 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR4A1P22736 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR4A1P22736 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR4A1P22736 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR4A1P22736 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR4A1P22736 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NR4A1P22736 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR4A1P22736 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.41■□□□□ 0.7
NR4A1P22736 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NR4A1P22736 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NR4A1P22736 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NR4A1P22736 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR4A1P22736 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR4A1P22736 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NR4A1P22736 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.4■□□□□ 0.7
NR4A1P22736 AC096631.2-201ENST00000436136 790 ntBASIC19.4■□□□□ 0.7
NR4A1P22736 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.4■□□□□ 0.7
NR4A1P22736 DUX4L19-201ENST00000557448 1267 ntBASIC19.4■□□□□ 0.7
NR4A1P22736 AC099791.2-201ENST00000605725 427 ntBASIC19.4■□□□□ 0.7
NR4A1P22736 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NR4A1P22736 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR4A1P22736 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR4A1P22736 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NR4A1P22736 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR4A1P22736 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NR4A1P22736 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR4A1P22736 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
NR4A1P22736 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NR4A1P22736 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms