Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 DUX4L19-201ENST00000557448 1267 ntBASIC19.56■□□□□ 0.72
TNFRSF1BP20333 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 FEM1AP1-201ENST00000431297 1995 ntBASIC19.55■□□□□ 0.72
TNFRSF1BP20333 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.55■□□□□ 0.72
TNFRSF1BP20333 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF1BP20333 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.53■□□□□ 0.72
TNFRSF1BP20333 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFRSF1BP20333 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFRSF1BP20333 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFRSF1BP20333 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.52■□□□□ 0.72
TNFRSF1BP20333 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFRSF1BP20333 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.52■□□□□ 0.72
TNFRSF1BP20333 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.52■□□□□ 0.72
TNFRSF1BP20333 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFRSF1BP20333 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFRSF1BP20333 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.52■□□□□ 0.71
TNFRSF1BP20333 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFRSF1BP20333 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFRSF1BP20333 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 SMUG1P1-201ENST00000590640 811 ntBASIC19.51■□□□□ 0.71
TNFRSF1BP20333 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF1BP20333 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms