Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRM3P20309 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHRM3P20309 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CHRM3P20309 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHRM3P20309 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRM3P20309 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.96■□□□□ 0.95
CHRM3P20309 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHRM3P20309 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHRM3P20309 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.96■□□□□ 0.95
CHRM3P20309 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRM3P20309 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHRM3P20309 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRM3P20309 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.95■□□□□ 0.94
CHRM3P20309 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRM3P20309 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRM3P20309 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRM3P20309 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRM3P20309 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRM3P20309 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRM3P20309 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.95■□□□□ 0.94
CHRM3P20309 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.95■□□□□ 0.94
CHRM3P20309 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRM3P20309 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRM3P20309 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.95■□□□□ 0.94
CHRM3P20309 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.95■□□□□ 0.94
CHRM3P20309 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.95■□□□□ 0.94
CHRM3P20309 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRM3P20309 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRM3P20309 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRM3P20309 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRM3P20309 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.94■□□□□ 0.94
CHRM3P20309 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.94■□□□□ 0.94
CHRM3P20309 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.94■□□□□ 0.94
CHRM3P20309 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.94■□□□□ 0.94
CHRM3P20309 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.94■□□□□ 0.94
CHRM3P20309 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRM3P20309 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRM3P20309 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.93■□□□□ 0.94
CHRM3P20309 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHRM3P20309 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRM3P20309 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHRM3P20309 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHRM3P20309 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.93■□□□□ 0.94
CHRM3P20309 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.93■□□□□ 0.94
CHRM3P20309 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRM3P20309 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRM3P20309 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.93■□□□□ 0.94
CHRM3P20309 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRM3P20309 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRM3P20309 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRM3P20309 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRM3P20309 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRM3P20309 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRM3P20309 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRM3P20309 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRM3P20309 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CHRM3P20309 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.92■□□□□ 0.94
CHRM3P20309 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.92■□□□□ 0.94
CHRM3P20309 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRM3P20309 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRM3P20309 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRM3P20309 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRM3P20309 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRM3P20309 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRM3P20309 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRM3P20309 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRM3P20309 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRM3P20309 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRM3P20309 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.91■□□□□ 0.94
CHRM3P20309 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRM3P20309 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHRM3P20309 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.91■□□□□ 0.94
CHRM3P20309 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.91■□□□□ 0.94
CHRM3P20309 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHRM3P20309 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.91■□□□□ 0.94
CHRM3P20309 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHRM3P20309 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRM3P20309 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.91■□□□□ 0.94
CHRM3P20309 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRM3P20309 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRM3P20309 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRM3P20309 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRM3P20309 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRM3P20309 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRM3P20309 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRM3P20309 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRM3P20309 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.9■□□□□ 0.94
CHRM3P20309 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRM3P20309 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRM3P20309 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
CHRM3P20309 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRM3P20309 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.9■□□□□ 0.94
CHRM3P20309 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRM3P20309 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRM3P20309 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.9■□□□□ 0.94
CHRM3P20309 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRM3P20309 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRM3P20309 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRM3P20309 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRM3P20309 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms