Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
BMP4P12644 ZNRF2P3-201ENST00000424200 374 ntBASIC19.22■□□□□ 0.67
BMP4P12644 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BMP4P12644 AC105265.2-201ENST00000467189 838 ntBASIC19.22■□□□□ 0.67
BMP4P12644 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BMP4P12644 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
BMP4P12644 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.22■□□□□ 0.67
BMP4P12644 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
BMP4P12644 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.22■□□□□ 0.67
BMP4P12644 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.22■□□□□ 0.67
BMP4P12644 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.21■□□□□ 0.67
BMP4P12644 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BMP4P12644 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.21■□□□□ 0.67
BMP4P12644 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BMP4P12644 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BMP4P12644 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
BMP4P12644 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BMP4P12644 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
BMP4P12644 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.21■□□□□ 0.67
BMP4P12644 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
BMP4P12644 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BMP4P12644 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.21■□□□□ 0.67
BMP4P12644 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BMP4P12644 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.21■□□□□ 0.67
BMP4P12644 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
BMP4P12644 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
BMP4P12644 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BMP4P12644 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.21■□□□□ 0.67
BMP4P12644 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.21■□□□□ 0.67
BMP4P12644 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
BMP4P12644 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BMP4P12644 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BMP4P12644 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.2■□□□□ 0.66
BMP4P12644 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BMP4P12644 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BMP4P12644 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BMP4P12644 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BMP4P12644 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BMP4P12644 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BMP4P12644 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.2■□□□□ 0.66
BMP4P12644 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.2■□□□□ 0.66
BMP4P12644 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
BMP4P12644 AC008764.7-201ENST00000593779 1081 ntBASIC19.2■□□□□ 0.66
BMP4P12644 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
BMP4P12644 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BMP4P12644 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BMP4P12644 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.2■□□□□ 0.66
BMP4P12644 AC087289.5-201ENST00000586076 3175 ntBASIC19.2■□□□□ 0.66
BMP4P12644 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.19■□□□□ 0.66
BMP4P12644 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.19■□□□□ 0.66
BMP4P12644 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.19■□□□□ 0.66
BMP4P12644 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.19■□□□□ 0.66
BMP4P12644 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.19■□□□□ 0.66
BMP4P12644 MIR3181-201ENST00000578512 73 ntBASIC19.19■□□□□ 0.66
BMP4P12644 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.19■□□□□ 0.66
BMP4P12644 CA15P2-201ENST00000611168 834 ntBASIC19.19■□□□□ 0.66
BMP4P12644 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
BMP4P12644 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.19■□□□□ 0.66
BMP4P12644 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BMP4P12644 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
BMP4P12644 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
BMP4P12644 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.19■□□□□ 0.66
BMP4P12644 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.19■□□□□ 0.66
BMP4P12644 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
BMP4P12644 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BMP4P12644 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
BMP4P12644 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BMP4P12644 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BMP4P12644 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BMP4P12644 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.18■□□□□ 0.66
BMP4P12644 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BMP4P12644 AC233992.3-201ENST00000607491 485 ntBASIC19.18■□□□□ 0.66
BMP4P12644 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BMP4P12644 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BMP4P12644 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.18■□□□□ 0.66
BMP4P12644 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BMP4P12644 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
BMP4P12644 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BMP4P12644 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BMP4P12644 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.18■□□□□ 0.66
BMP4P12644 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
BMP4P12644 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.18■□□□□ 0.66
BMP4P12644 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BMP4P12644 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BMP4P12644 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms