Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 MUD1YBR119W 897 nt2.64□□□□□ -1.99
TY1B-PR2P0C2J0 LTE1YAL024C 4308 nt2.63□□□□□ -1.99
TY1B-PR2P0C2J0 ATG29YPL166W 642 nt2.63□□□□□ -1.99
TY1B-PR2P0C2J0 SNX41YDR425W 1878 nt2.63□□□□□ -1.99
TY1B-PR2P0C2J0 RKM3YBR030W 1659 nt2.62□□□□□ -1.99
TY1B-PR2P0C2J0 MDM20YOL076W 2391 nt2.62□□□□□ -1.99
TY1B-PR2P0C2J0 RTS3YGR161C 792 nt2.62□□□□□ -1.99
TY1B-PR2P0C2J0 AIM39YOL053W 1188 nt2.62□□□□□ -1.99
TY1B-PR2P0C2J0 HEM4YOR278W 828 nt2.62□□□□□ -1.99
TY1B-PR2P0C2J0 ERV29YGR284C 933 nt2.61□□□□□ -1.99
TY1B-PR2P0C2J0 BTS1YPL069C 1008 nt2.61□□□□□ -1.99
TY1B-PR2P0C2J0 ATG32YIL146C 1590 nt2.61□□□□□ -1.99
TY1B-PR2P0C2J0 SPC72YAL047C 1869 nt2.61□□□□□ -1.99
TY1B-PR2P0C2J0 SAE2YGL175C 1038 nt2.61□□□□□ -1.99
TY1B-PR2P0C2J0 KOG1YHR186C 4674 nt2.61□□□□□ -1.99
TY1B-PR2P0C2J0 DSL1YNL258C 2265 nt2.6□□□□□ -1.99
TY1B-PR2P0C2J0 HDA2YDR295C 2025 nt2.6□□□□□ -1.99
TY1B-PR2P0C2J0 VMA8YEL051W 771 nt2.6□□□□□ -1.99
TY1B-PR2P0C2J0 YOS1YER074W-A 258 nt2.6□□□□□ -1.99
TY1B-PR2P0C2J0 UBP12YJL197W 3765 nt2.6□□□□□ -1.99
TY1B-PR2P0C2J0 CHS1YNL192W 3396 nt2.59□□□□□ -1.99
TY1B-PR2P0C2J0 NOP6YDL213C 678 nt2.59□□□□□ -1.99
TY1B-PR2P0C2J0 NCB2YDR397C 441 nt2.59□□□□□ -2
TY1B-PR2P0C2J0 SEC28YIL076W 891 nt2.59□□□□□ -2
TY1B-PR2P0C2J0 SEC7YDR170C 6030 nt2.58□□□□□ -2
TY1B-PR2P0C2J0 NAT1YDL040C 2565 nt2.58□□□□□ -2
TY1B-PR2P0C2J0 NRP1YDL167C 2160 nt2.58□□□□□ -2
TY1B-PR2P0C2J0 IML1YJR138W 4755 nt2.58□□□□□ -2
TY1B-PR2P0C2J0 YJL181WYJL181W 1836 nt2.58□□□□□ -2
TY1B-PR2P0C2J0 YDL041WYDL041W 354 nt2.58□□□□□ -2
TY1B-PR2P0C2J0 YKL075CYKL075C 1353 nt2.58□□□□□ -2
TY1B-PR2P0C2J0 PSD2YGR170W 3417 nt2.57□□□□□ -2
TY1B-PR2P0C2J0 YAE1YJR067C 426 nt2.57□□□□□ -2
TY1B-PR2P0C2J0 YMR306C-AYMR306C-A 390 nt2.57□□□□□ -2
TY1B-PR2P0C2J0 HAT1YPL001W 1125 nt2.57□□□□□ -2
TY1B-PR2P0C2J0 ARA1YBR149W 1035 nt2.57□□□□□ -2
TY1B-PR2P0C2J0 KRE2YDR483W 1329 nt2.57□□□□□ -2
TY1B-PR2P0C2J0 IMH1YLR309C 2736 nt2.57□□□□□ -2
TY1B-PR2P0C2J0 TVP15YDR100W 432 nt2.56□□□□□ -2
TY1B-PR2P0C2J0 ECM13YBL043W 774 nt2.56□□□□□ -2
TY1B-PR2P0C2J0 CPR8YNR028W 927 nt2.56□□□□□ -2
TY1B-PR2P0C2J0 TOP1YOL006C 2310 nt2.56□□□□□ -2
TY1B-PR2P0C2J0 SHE4YOR035C 2370 nt2.56□□□□□ -2
TY1B-PR2P0C2J0 SCP1YOR367W 603 nt2.56□□□□□ -2
TY1B-PR2P0C2J0 ALG1YBR110W 1350 nt2.56□□□□□ -2
TY1B-PR2P0C2J0 VPS16YPL045W 2397 nt2.56□□□□□ -2
TY1B-PR2P0C2J0 VPS8YAL002W 3825 nt2.55□□□□□ -2
TY1B-PR2P0C2J0 POL2YNL262W 6669 nt2.55□□□□□ -2
TY1B-PR2P0C2J0 YML096WYML096W 1578 nt2.55□□□□□ -2
TY1B-PR2P0C2J0 YOL079WYOL079W 399 nt2.55□□□□□ -2
TY1B-PR2P0C2J0 LCB4YOR171C 1875 nt2.55□□□□□ -2
TY1B-PR2P0C2J0 YGR130CYGR130C 2451 nt2.55□□□□□ -2
TY1B-PR2P0C2J0 CLB4YLR210W 1383 nt2.54□□□□□ -2
TY1B-PR2P0C2J0 YPR1YDR368W 939 nt2.54□□□□□ -2
TY1B-PR2P0C2J0 IKI1YHR187W 930 nt2.54□□□□□ -2
TY1B-PR2P0C2J0 PDR17YNL264C 1053 nt2.54□□□□□ -2
TY1B-PR2P0C2J0 BUD6YLR319C 2367 nt2.54□□□□□ -2
TY1B-PR2P0C2J0 RTP1YMR185W 2946 nt2.54□□□□□ -2
TY1B-PR2P0C2J0 MRPS17YMR188C 714 nt2.54□□□□□ -2
TY1B-PR2P0C2J0 PZF1YPR186C 1290 nt2.54□□□□□ -2
TY1B-PR2P0C2J0 YPR203WYPR203W 309 nt2.54□□□□□ -2
TY1B-PR2P0C2J0 YDR239CYDR239C 2364 nt2.53□□□□□ -2
TY1B-PR2P0C2J0 CPA2YJR109C 3357 nt2.53□□□□□ -2
TY1B-PR2P0C2J0 YML090WYML090W 387 nt2.53□□□□□ -2
TY1B-PR2P0C2J0 FOL3YMR113W 1284 nt2.53□□□□□ -2
TY1B-PR2P0C2J0 LRE1YCL051W 1752 nt2.53□□□□□ -2
TY1B-PR2P0C2J0 LSM1YJL124C 519 nt2.52□□□□□ -2.01
TY1B-PR2P0C2J0 CSI1YMR025W 888 nt2.52□□□□□ -2.01
TY1B-PR2P0C2J0 SMC1YFL008W 3678 nt2.52□□□□□ -2.01
TY1B-PR2P0C2J0 RUF21RUF21 707 nt2.51□□□□□ -2.01
TY1B-PR2P0C2J0 ARO7YPR060C 771 nt2.51□□□□□ -2.01
TY1B-PR2P0C2J0 SEC16YPL085W 6588 nt2.51□□□□□ -2.01
TY1B-PR2P0C2J0 SKT5YBL061C 2091 nt2.51□□□□□ -2.01
TY1B-PR2P0C2J0 NET1YJL076W 3570 nt2.51□□□□□ -2.01
TY1B-PR2P0C2J0 MOT1YPL082C 5604 nt2.51□□□□□ -2.01
TY1B-PR2P0C2J0 MRPL17YNL252C 846 nt2.51□□□□□ -2.01
TY1B-PR2P0C2J0 CDC31YOR257W 486 nt2.51□□□□□ -2.01
TY1B-PR2P0C2J0 APL2YKL135C 2181 nt2.51□□□□□ -2.01
TY1B-PR2P0C2J0 IRC10YOL015W 1761 nt2.5□□□□□ -2.01
TY1B-PR2P0C2J0 YER068C-AYER068C-A 432 nt2.5□□□□□ -2.01
TY1B-PR2P0C2J0 CAP1YKL007W 807 nt2.5□□□□□ -2.01
TY1B-PR2P0C2J0 COQ9YLR201C 783 nt2.5□□□□□ -2.01
TY1B-PR2P0C2J0 TPS2YDR074W 2691 nt2.5□□□□□ -2.01
TY1B-PR2P0C2J0 YOR365CYOR365C 2112 nt2.5□□□□□ -2.01
TY1B-PR2P0C2J0 YFH1YDL120W 525 nt2.49□□□□□ -2.01
TY1B-PR2P0C2J0 RTT102YGR275W 474 nt2.49□□□□□ -2.01
TY1B-PR2P0C2J0 SDP1YIL113W 630 nt2.49□□□□□ -2.01
TY1B-PR2P0C2J0 CDC73YLR418C 1182 nt2.49□□□□□ -2.01
TY1B-PR2P0C2J0 PAI3YMR174C 207 nt2.49□□□□□ -2.01
TY1B-PR2P0C2J0 MGA2YIR033W 3342 nt2.49□□□□□ -2.01
TY1B-PR2P0C2J0 YDR203WYDR203W 318 nt2.49□□□□□ -2.01
TY1B-PR2P0C2J0 CAB2YIL083C 1098 nt2.49□□□□□ -2.01
TY1B-PR2P0C2J0 CYR1YJL005W 6081 nt2.48□□□□□ -2.01
TY1B-PR2P0C2J0 YJL028WYJL028W 336 nt2.48□□□□□ -2.01
TY1B-PR2P0C2J0 CWC24YLR323C 780 nt2.48□□□□□ -2.01
TY1B-PR2P0C2J0 REC114YMR133W 1287 nt2.48□□□□□ -2.01
TY1B-PR2P0C2J0 YOR097CYOR097C 528 nt2.48□□□□□ -2.01
TY1B-PR2P0C2J0 PHO81YGR233C 3537 nt2.48□□□□□ -2.01
TY1B-PR2P0C2J0 TUS1YLR425W 3924 nt2.47□□□□□ -2.01
TY1B-PR2P0C2J0 YDL118WYDL118W 381 nt2.47□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 46.6 ms