Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.32■■□□□ 1
MMP2P08253 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.32■■□□□ 1
MMP2P08253 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.32■■□□□ 1
MMP2P08253 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.32■■□□□ 1
MMP2P08253 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
MMP2P08253 FEM1AP4-201ENST00000443167 1987 ntBASIC21.32■■□□□ 1
MMP2P08253 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
MMP2P08253 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.31■■□□□ 1
MMP2P08253 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.31■■□□□ 1
MMP2P08253 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.31■■□□□ 1
MMP2P08253 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.31■■□□□ 1
MMP2P08253 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.31■■□□□ 1
MMP2P08253 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.31■■□□□ 1
MMP2P08253 AC138907.5-202ENST00000569484 235 ntBASIC21.31■■□□□ 1
MMP2P08253 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.31■■□□□ 1
MMP2P08253 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MMP2P08253 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP2P08253 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.31■■□□□ 1
MMP2P08253 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.31■■□□□ 1
MMP2P08253 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.31■■□□□ 1
MMP2P08253 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.31■■□□□ 1
MMP2P08253 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.31■■□□□ 1
MMP2P08253 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP2P08253 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.3■■□□□ 1
MMP2P08253 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.3■■□□□ 1
MMP2P08253 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP2P08253 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP2P08253 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.3■■□□□ 1
MMP2P08253 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.3■■□□□ 1
MMP2P08253 AC061975.6-201ENST00000579045 1553 ntBASIC21.3■■□□□ 1
MMP2P08253 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
MMP2P08253 AL024507.2-201ENST00000606070 2574 ntBASIC21.3■■□□□ 1
MMP2P08253 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP2P08253 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP2P08253 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MMP2P08253 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP2P08253 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP2P08253 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.29■■□□□ 1
MMP2P08253 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP2P08253 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.29■■□□□ 1
MMP2P08253 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP2P08253 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MMP2P08253 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.29■■□□□ 1
MMP2P08253 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.29■■□□□ 1
MMP2P08253 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP2P08253 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP2P08253 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP2P08253 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
MMP2P08253 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MMP2P08253 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP2P08253 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.29■■□□□ 1
MMP2P08253 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP2P08253 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.28■■□□□ 1
MMP2P08253 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP2P08253 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.28■■□□□ 1
MMP2P08253 AC010141.2-201ENST00000452426 721 ntBASIC21.28■■□□□ 1
MMP2P08253 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP2P08253 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.28■■□□□ 1
MMP2P08253 NTF6G-201ENST00000591094 616 ntBASIC21.28■■□□□ 1
MMP2P08253 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.28■■□□□ 1
MMP2P08253 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP2P08253 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.28■■□□□ 1
MMP2P08253 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP2P08253 AF106564.1-201ENST00000607058 2553 ntBASIC21.28■■□□□ 1
MMP2P08253 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
MMP2P08253 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
MMP2P08253 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP2P08253 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP2P08253 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
MMP2P08253 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
MMP2P08253 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP2P08253 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
MMP2P08253 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.27■■□□□ 1
MMP2P08253 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP2P08253 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP2P08253 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.27■■□□□ 1
MMP2P08253 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.27■■□□□ 1
MMP2P08253 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.27■■□□□ 1
MMP2P08253 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.27■■□□□ 1
MMP2P08253 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.27■■□□□ 1
MMP2P08253 KRT18P5-201ENST00000436075 1291 ntBASIC21.27■■□□□ 1
MMP2P08253 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.27■■□□□ 1
MMP2P08253 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.27■■□□□ 1
MMP2P08253 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.27■■□□□ 1
MMP2P08253 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.27■■□□□ 1
MMP2P08253 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP2P08253 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.27■■□□□ 1
MMP2P08253 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
MMP2P08253 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP2P08253 AL137060.1-201ENST00000618151 2648 ntBASIC21.26■□□□□ 0.99
MMP2P08253 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
MMP2P08253 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP2P08253 MIR935-201ENST00000401179 91 ntBASIC21.26■□□□□ 0.99
MMP2P08253 AP001160.3-201ENST00000601484 763 ntBASIC21.26■□□□□ 0.99
MMP2P08253 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP2P08253 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP2P08253 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
MMP2P08253 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP2P08253 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP2P08253 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms