Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CSF1RP07333 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.16■■□□□ 1.78
CSF1RP07333 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.16■■□□□ 1.78
CSF1RP07333 AC068473.5-201ENST00000616428 2072 ntBASIC26.16■■□□□ 1.78
CSF1RP07333 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
CSF1RP07333 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CSF1RP07333 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSF1RP07333 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSF1RP07333 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
CSF1RP07333 AC073210.2-201ENST00000430369 194 ntBASIC26.15■■□□□ 1.78
CSF1RP07333 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CSF1RP07333 AL162412.1-201ENST00000567129 965 ntBASIC26.15■■□□□ 1.78
CSF1RP07333 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.15■■□□□ 1.78
CSF1RP07333 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CSF1RP07333 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSF1RP07333 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSF1RP07333 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CSF1RP07333 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CSF1RP07333 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.15■■□□□ 1.78
CSF1RP07333 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CSF1RP07333 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.14■■□□□ 1.78
CSF1RP07333 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
CSF1RP07333 SLC29A4P1-201ENST00000398760 971 ntBASIC26.14■■□□□ 1.78
CSF1RP07333 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CSF1RP07333 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.14■■□□□ 1.78
CSF1RP07333 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.14■■□□□ 1.78
CSF1RP07333 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CSF1RP07333 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.14■■□□□ 1.78
CSF1RP07333 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CSF1RP07333 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CSF1RP07333 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
CSF1RP07333 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CSF1RP07333 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CSF1RP07333 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CSF1RP07333 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CSF1RP07333 AC093787.1-201ENST00000450396 207 ntBASIC26.13■■□□□ 1.77
CSF1RP07333 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.13■■□□□ 1.77
CSF1RP07333 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CSF1RP07333 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CSF1RP07333 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.13■■□□□ 1.77
CSF1RP07333 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CSF1RP07333 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CSF1RP07333 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CSF1RP07333 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CSF1RP07333 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSF1RP07333 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.12■■□□□ 1.77
CSF1RP07333 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CSF1RP07333 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSF1RP07333 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSF1RP07333 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSF1RP07333 APTR-205ENST00000447009 902 ntTSL 2 BASIC26.12■■□□□ 1.77
CSF1RP07333 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC26.12■■□□□ 1.77
CSF1RP07333 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.12■■□□□ 1.77
CSF1RP07333 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.12■■□□□ 1.77
CSF1RP07333 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.12■■□□□ 1.77
CSF1RP07333 AL591742.1-201ENST00000604433 565 ntBASIC26.12■■□□□ 1.77
CSF1RP07333 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.12■■□□□ 1.77
CSF1RP07333 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.12■■□□□ 1.77
CSF1RP07333 GUSBP5-202ENST00000510805 1989 ntBASIC26.12■■□□□ 1.77
CSF1RP07333 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CSF1RP07333 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CSF1RP07333 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.11■■□□□ 1.77
CSF1RP07333 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.11■■□□□ 1.77
CSF1RP07333 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.11■■□□□ 1.77
CSF1RP07333 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CSF1RP07333 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CSF1RP07333 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.11■■□□□ 1.77
CSF1RP07333 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.11■■□□□ 1.77
CSF1RP07333 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.11■■□□□ 1.77
CSF1RP07333 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.11■■□□□ 1.77
CSF1RP07333 C11orf96-202ENST00000528572 1834 ntBASIC26.11■■□□□ 1.77
CSF1RP07333 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CSF1RP07333 AC233723.2-201ENST00000623798 2106 ntBASIC26.11■■□□□ 1.77
CSF1RP07333 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
CSF1RP07333 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
CSF1RP07333 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CSF1RP07333 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CSF1RP07333 AC069152.1-201ENST00000438030 544 ntBASIC26.1■■□□□ 1.77
CSF1RP07333 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CSF1RP07333 AC016405.3-201ENST00000607710 860 ntBASIC26.1■■□□□ 1.77
CSF1RP07333 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CSF1RP07333 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSF1RP07333 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSF1RP07333 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSF1RP07333 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSF1RP07333 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CSF1RP07333 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
CSF1RP07333 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CSF1RP07333 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CSF1RP07333 MIPEPP3-201ENST00000412105 444 ntBASIC26.09■■□□□ 1.77
CSF1RP07333 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.09■■□□□ 1.77
CSF1RP07333 AC098934.4-201ENST00000564127 592 ntBASIC26.09■■□□□ 1.77
CSF1RP07333 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.09■■□□□ 1.77
CSF1RP07333 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.09■■□□□ 1.77
CSF1RP07333 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CSF1RP07333 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CSF1RP07333 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.08■■□□□ 1.77
CSF1RP07333 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.08■■□□□ 1.77
CSF1RP07333 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
CSF1RP07333 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms