Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAF1P04049 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAF1P04049 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAF1P04049 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RAF1P04049 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.02■□□□□ 0.64
RAF1P04049 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RAF1P04049 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RAF1P04049 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.02■□□□□ 0.64
RAF1P04049 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RAF1P04049 AL499627.2-201ENST00000606283 725 ntBASIC19.02■□□□□ 0.64
RAF1P04049 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RAF1P04049 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.02■□□□□ 0.64
RAF1P04049 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAF1P04049 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAF1P04049 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAF1P04049 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RAF1P04049 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAF1P04049 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAF1P04049 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAF1P04049 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RAF1P04049 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RAF1P04049 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.01■□□□□ 0.63
RAF1P04049 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.01■□□□□ 0.63
RAF1P04049 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAF1P04049 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RAF1P04049 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAF1P04049 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.01■□□□□ 0.63
RAF1P04049 AP005435.1-201ENST00000529293 1178 ntBASIC19.01■□□□□ 0.63
RAF1P04049 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAF1P04049 AC010525.1-201ENST00000585559 441 ntBASIC19.01■□□□□ 0.63
RAF1P04049 AC105233.4-201ENST00000642045 216 ntBASIC19.01■□□□□ 0.63
RAF1P04049 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAF1P04049 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RAF1P04049 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.01■□□□□ 0.63
RAF1P04049 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.01■□□□□ 0.63
RAF1P04049 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.01■□□□□ 0.63
RAF1P04049 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RAF1P04049 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19■□□□□ 0.63
RAF1P04049 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
RAF1P04049 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RAF1P04049 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RAF1P04049 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19■□□□□ 0.63
RAF1P04049 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RAF1P04049 AC137761.2-201ENST00000561729 223 ntBASIC19■□□□□ 0.63
RAF1P04049 AC145350.3-201ENST00000569033 163 ntBASIC19■□□□□ 0.63
RAF1P04049 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19■□□□□ 0.63
RAF1P04049 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19■□□□□ 0.63
RAF1P04049 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
RAF1P04049 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RAF1P04049 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAF1P04049 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAF1P04049 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RAF1P04049 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.99■□□□□ 0.63
RAF1P04049 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAF1P04049 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAF1P04049 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.99■□□□□ 0.63
RAF1P04049 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.99■□□□□ 0.63
RAF1P04049 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RAF1P04049 AC006015.1-201ENST00000429970 570 ntBASIC18.99■□□□□ 0.63
RAF1P04049 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAF1P04049 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAF1P04049 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.99■□□□□ 0.63
RAF1P04049 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RAF1P04049 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAF1P04049 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RAF1P04049 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RAF1P04049 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.99■□□□□ 0.63
RAF1P04049 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAF1P04049 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAF1P04049 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAF1P04049 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAF1P04049 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RAF1P04049 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.98■□□□□ 0.63
RAF1P04049 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.98■□□□□ 0.63
RAF1P04049 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.98■□□□□ 0.63
RAF1P04049 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAF1P04049 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.98■□□□□ 0.63
RAF1P04049 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.98■□□□□ 0.63
RAF1P04049 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.98■□□□□ 0.63
RAF1P04049 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAF1P04049 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAF1P04049 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.98■□□□□ 0.63
RAF1P04049 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAF1P04049 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAF1P04049 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.98■□□□□ 0.63
RAF1P04049 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.98■□□□□ 0.63
RAF1P04049 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAF1P04049 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms