Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
MT-ND3P03897 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND3P03897 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND3P03897 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
MT-ND3P03897 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.4■■□□□ 1.02
MT-ND3P03897 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MT-ND3P03897 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MT-ND3P03897 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
MT-ND3P03897 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.39■■□□□ 1.01
MT-ND3P03897 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND3P03897 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.39■■□□□ 1.01
MT-ND3P03897 AC026271.2-201ENST00000428091 497 ntBASIC21.39■■□□□ 1.01
MT-ND3P03897 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.39■■□□□ 1.01
MT-ND3P03897 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.39■■□□□ 1.01
MT-ND3P03897 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND3P03897 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.39■■□□□ 1.01
MT-ND3P03897 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND3P03897 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-ND3P03897 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-ND3P03897 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND3P03897 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND3P03897 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
MT-ND3P03897 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND3P03897 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND3P03897 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND3P03897 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-ND3P03897 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.38■■□□□ 1.01
MT-ND3P03897 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND3P03897 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
MT-ND3P03897 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND3P03897 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
MT-ND3P03897 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND3P03897 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND3P03897 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.37■■□□□ 1.01
MT-ND3P03897 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND3P03897 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
MT-ND3P03897 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND3P03897 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
MT-ND3P03897 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND3P03897 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND3P03897 AC099791.1-201ENST00000416440 715 ntBASIC21.37■■□□□ 1.01
MT-ND3P03897 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND3P03897 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.37■■□□□ 1.01
MT-ND3P03897 pRNA.6-201ENST00000610482 90 ntBASIC21.37■■□□□ 1.01
MT-ND3P03897 pRNA.5-201ENST00000612139 90 ntBASIC21.37■■□□□ 1.01
MT-ND3P03897 pRNA.11-201ENST00000618423 90 ntBASIC21.37■■□□□ 1.01
MT-ND3P03897 pRNA.13-201ENST00000619112 90 ntBASIC21.37■■□□□ 1.01
MT-ND3P03897 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND3P03897 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.37■■□□□ 1.01
MT-ND3P03897 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND3P03897 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
MT-ND3P03897 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND3P03897 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND3P03897 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND3P03897 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND3P03897 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.36■■□□□ 1.01
MT-ND3P03897 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND3P03897 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.36■■□□□ 1.01
MT-ND3P03897 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
MT-ND3P03897 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND3P03897 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.36■■□□□ 1.01
MT-ND3P03897 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND3P03897 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND3P03897 MIR3181-201ENST00000578512 73 ntBASIC21.36■■□□□ 1.01
MT-ND3P03897 AC233992.3-201ENST00000607491 485 ntBASIC21.36■■□□□ 1.01
MT-ND3P03897 AC068587.7-201ENST00000641602 218 ntBASIC21.36■■□□□ 1.01
MT-ND3P03897 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND3P03897 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
MT-ND3P03897 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
MT-ND3P03897 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND3P03897 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND3P03897 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND3P03897 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND3P03897 OXCT2P1-201ENST00000447263 1535 ntBASIC21.35■■□□□ 1.01
MT-ND3P03897 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND3P03897 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND3P03897 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND3P03897 IRS3P-201ENST00000223076 1006 ntBASIC21.35■■□□□ 1.01
MT-ND3P03897 BX842568.3-201ENST00000418104 571 ntBASIC21.35■■□□□ 1.01
MT-ND3P03897 AC006455.2-201ENST00000429931 906 ntBASIC21.35■■□□□ 1.01
MT-ND3P03897 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.35■■□□□ 1.01
MT-ND3P03897 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND3P03897 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.35■■□□□ 1.01
MT-ND3P03897 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND3P03897 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.35■■□□□ 1.01
MT-ND3P03897 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.35■■□□□ 1.01
MT-ND3P03897 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND3P03897 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.35■■□□□ 1.01
MT-ND3P03897 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND3P03897 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND3P03897 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
MT-ND3P03897 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND3P03897 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND3P03897 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND3P03897 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-ND3P03897 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-ND3P03897 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
MT-ND3P03897 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-ND3P03897 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.34■■□□□ 1.01
MT-ND3P03897 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms