Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SMUG1P1-201ENST00000590640 811 ntBASIC18.56■□□□□ 0.56
APOC1P02654 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.56■□□□□ 0.56
APOC1P02654 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APOC1P02654 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.56■□□□□ 0.56
APOC1P02654 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOC1P02654 AF106564.1-201ENST00000607058 2553 ntBASIC18.56■□□□□ 0.56
APOC1P02654 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOC1P02654 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APOC1P02654 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.55■□□□□ 0.56
APOC1P02654 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
APOC1P02654 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.55■□□□□ 0.56
APOC1P02654 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
APOC1P02654 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOC1P02654 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
APOC1P02654 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.55■□□□□ 0.56
APOC1P02654 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOC1P02654 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOC1P02654 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOC1P02654 AC096631.2-201ENST00000436136 790 ntBASIC18.55■□□□□ 0.56
APOC1P02654 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
APOC1P02654 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.55■□□□□ 0.56
APOC1P02654 AC106739.1-201ENST00000617035 715 ntBASIC18.55■□□□□ 0.56
APOC1P02654 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
APOC1P02654 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.55■□□□□ 0.56
APOC1P02654 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
APOC1P02654 AC009237.3-201ENST00000393279 1427 ntBASIC18.55■□□□□ 0.56
APOC1P02654 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.55■□□□□ 0.56
APOC1P02654 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOC1P02654 AC026471.6-201ENST00000622954 1905 ntBASIC18.55■□□□□ 0.56
APOC1P02654 AP006587.3-201ENST00000525742 1516 ntBASIC18.54■□□□□ 0.56
APOC1P02654 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOC1P02654 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOC1P02654 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOC1P02654 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOC1P02654 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.54■□□□□ 0.56
APOC1P02654 AC008764.7-201ENST00000593779 1081 ntBASIC18.54■□□□□ 0.56
APOC1P02654 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.54■□□□□ 0.56
APOC1P02654 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.54■□□□□ 0.56
APOC1P02654 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.54■□□□□ 0.56
APOC1P02654 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOC1P02654 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOC1P02654 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOC1P02654 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.54■□□□□ 0.56
APOC1P02654 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
APOC1P02654 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.53■□□□□ 0.56
APOC1P02654 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
APOC1P02654 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
APOC1P02654 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.53■□□□□ 0.56
APOC1P02654 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.53■□□□□ 0.56
APOC1P02654 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.53■□□□□ 0.56
APOC1P02654 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.53■□□□□ 0.56
APOC1P02654 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.53■□□□□ 0.56
APOC1P02654 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
APOC1P02654 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
APOC1P02654 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
APOC1P02654 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.53■□□□□ 0.56
APOC1P02654 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.53■□□□□ 0.56
APOC1P02654 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOC1P02654 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOC1P02654 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APOC1P02654 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
APOC1P02654 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOC1P02654 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
APOC1P02654 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
APOC1P02654 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.52■□□□□ 0.56
APOC1P02654 AL391422.3-201ENST00000603791 2761 ntBASIC18.52■□□□□ 0.56
APOC1P02654 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
APOC1P02654 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOC1P02654 AC099791.1-201ENST00000416440 715 ntBASIC18.52■□□□□ 0.56
APOC1P02654 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.52■□□□□ 0.56
APOC1P02654 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.52■□□□□ 0.56
APOC1P02654 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
APOC1P02654 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.52■□□□□ 0.56
APOC1P02654 AL355001.2-201ENST00000620617 1191 ntBASIC18.52■□□□□ 0.56
APOC1P02654 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
APOC1P02654 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOC1P02654 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOC1P02654 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOC1P02654 AC003102.1-202ENST00000563394 1796 ntBASIC18.52■□□□□ 0.55
APOC1P02654 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APOC1P02654 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
APOC1P02654 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.52■□□□□ 0.55
APOC1P02654 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APOC1P02654 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
APOC1P02654 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APOC1P02654 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
APOC1P02654 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms