Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 AC009102.2-201ENST00000606772 1639 ntBASIC18.23■□□□□ 0.51
HLA-DQB1P01920 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 KRT8P33-201ENST00000508125 1423 ntBASIC18.23■□□□□ 0.51
HLA-DQB1P01920 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB1P01920 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB1P01920 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
HLA-DQB1P01920 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.22■□□□□ 0.51
HLA-DQB1P01920 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HLA-DQB1P01920 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB1P01920 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.22■□□□□ 0.51
HLA-DQB1P01920 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB1P01920 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB1P01920 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HLA-DQB1P01920 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DQB1P01920 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 AC027702.1-201ENST00000563810 1770 ntBASIC18.21■□□□□ 0.51
HLA-DQB1P01920 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQB1P01920 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
HLA-DQB1P01920 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 AL031848.2-201ENST00000607670 837 ntBASIC18.2■□□□□ 0.5
HLA-DQB1P01920 AL031602.1-201ENST00000633169 911 ntBASIC18.2■□□□□ 0.5
HLA-DQB1P01920 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.2■□□□□ 0.5
HLA-DQB1P01920 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 AC021242.3-201ENST00000607598 1377 ntBASIC18.19■□□□□ 0.5
HLA-DQB1P01920 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 AC098818.2-201ENST00000564925 2320 ntBASIC18.19■□□□□ 0.5
HLA-DQB1P01920 AL499627.2-201ENST00000606283 725 ntBASIC18.19■□□□□ 0.5
HLA-DQB1P01920 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DQB1P01920 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQB1P01920 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQB1P01920 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DQB1P01920 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DQB1P01920 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms