Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NGFP01138 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NGFP01138 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NGFP01138 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.28■□□□□ 0.52
NGFP01138 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NGFP01138 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NGFP01138 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.28■□□□□ 0.52
NGFP01138 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NGFP01138 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.28■□□□□ 0.52
NGFP01138 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.28■□□□□ 0.52
NGFP01138 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.28■□□□□ 0.52
NGFP01138 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.28■□□□□ 0.52
NGFP01138 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.28■□□□□ 0.52
NGFP01138 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NGFP01138 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NGFP01138 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NGFP01138 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NGFP01138 KRT87P-202ENST00000534226 1464 ntBASIC18.27■□□□□ 0.52
NGFP01138 AC007375.3-201ENST00000600936 2314 ntBASIC18.27■□□□□ 0.52
NGFP01138 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NGFP01138 Z98882.1-201ENST00000622160 2253 ntBASIC18.27■□□□□ 0.52
NGFP01138 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.27■□□□□ 0.52
NGFP01138 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NGFP01138 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.27■□□□□ 0.52
NGFP01138 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.27■□□□□ 0.52
NGFP01138 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NGFP01138 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NGFP01138 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
NGFP01138 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NGFP01138 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NGFP01138 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NGFP01138 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NGFP01138 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NGFP01138 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NGFP01138 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NGFP01138 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.26■□□□□ 0.51
NGFP01138 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.26■□□□□ 0.51
NGFP01138 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.26■□□□□ 0.51
NGFP01138 AC034268.1-201ENST00000441047 882 ntBASIC18.26■□□□□ 0.51
NGFP01138 EEF1DP3-203ENST00000566025 782 ntBASIC18.26■□□□□ 0.51
NGFP01138 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NGFP01138 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.26■□□□□ 0.51
NGFP01138 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NGFP01138 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NGFP01138 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.26■□□□□ 0.51
NGFP01138 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NGFP01138 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NGFP01138 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.26■□□□□ 0.51
NGFP01138 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NGFP01138 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NGFP01138 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.25■□□□□ 0.51
NGFP01138 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NGFP01138 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NGFP01138 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.25■□□□□ 0.51
NGFP01138 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.25■□□□□ 0.51
NGFP01138 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.25■□□□□ 0.51
NGFP01138 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NGFP01138 AC053503.5-201ENST00000601508 636 ntBASIC18.25■□□□□ 0.51
NGFP01138 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.25■□□□□ 0.51
NGFP01138 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NGFP01138 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NGFP01138 AC004854.2-201ENST00000608450 1441 ntBASIC18.24■□□□□ 0.51
NGFP01138 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NGFP01138 AC026310.3-201ENST00000625186 2373 ntBASIC18.24■□□□□ 0.51
NGFP01138 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NGFP01138 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.24■□□□□ 0.51
NGFP01138 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.24■□□□□ 0.51
NGFP01138 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.24■□□□□ 0.51
NGFP01138 AP004607.4-201ENST00000530158 1459 ntBASIC18.24■□□□□ 0.51
NGFP01138 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NGFP01138 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NGFP01138 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms