Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN1O95832 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN1O95832 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN1O95832 AC211429.1-201ENST00000415277 523 ntBASIC18.81■□□□□ 0.6
CLDN1O95832 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN1O95832 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CLDN1O95832 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN1O95832 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDN1O95832 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDN1O95832 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN1O95832 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN1O95832 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CLDN1O95832 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN1O95832 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN1O95832 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN1O95832 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CLDN1O95832 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLDN1O95832 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN1O95832 UNC93B5-201ENST00000530315 699 ntBASIC18.8■□□□□ 0.6
CLDN1O95832 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN1O95832 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN1O95832 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 AL359736.2-201ENST00000621992 437 ntBASIC18.8■□□□□ 0.6
CLDN1O95832 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLDN1O95832 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN1O95832 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN1O95832 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN1O95832 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN1O95832 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN1O95832 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CLDN1O95832 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLDN1O95832 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN1O95832 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN1O95832 AP003097.1-201ENST00000530657 1135 ntBASIC18.79■□□□□ 0.6
CLDN1O95832 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN1O95832 MIR4497-201ENST00000583208 89 ntBASIC18.79■□□□□ 0.6
CLDN1O95832 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN1O95832 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN1O95832 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN1O95832 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN1O95832 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN1O95832 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN1O95832 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN1O95832 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN1O95832 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN1O95832 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN1O95832 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLDN1O95832 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CLDN1O95832 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN1O95832 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN1O95832 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN1O95832 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN1O95832 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN1O95832 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN1O95832 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN1O95832 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN1O95832 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN1O95832 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN1O95832 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN1O95832 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.77■□□□□ 0.6
CLDN1O95832 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN1O95832 AC079630.1-202ENST00000618127 1840 ntBASIC18.77■□□□□ 0.6
CLDN1O95832 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN1O95832 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN1O95832 AC079834.2-201ENST00000609776 1949 ntBASIC18.77■□□□□ 0.6
CLDN1O95832 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN1O95832 MIR718-201ENST00000390190 70 ntBASIC18.77■□□□□ 0.6
CLDN1O95832 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN1O95832 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.77■□□□□ 0.6
CLDN1O95832 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.77■□□□□ 0.6
CLDN1O95832 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN1O95832 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
CLDN1O95832 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN1O95832 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CLDN1O95832 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN1O95832 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN1O95832 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLDN1O95832 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN1O95832 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN1O95832 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN1O95832 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN1O95832 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN1O95832 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN1O95832 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.76■□□□□ 0.59
CLDN1O95832 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.76■□□□□ 0.59
CLDN1O95832 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.76■□□□□ 0.59
CLDN1O95832 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN1O95832 REXO1L12P-201ENST00000622156 912 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms