Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.68■■□□□ 1.06
RPP40O75818 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPP40O75818 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.68■■□□□ 1.06
RPP40O75818 AP001160.3-201ENST00000601484 763 ntBASIC21.68■■□□□ 1.06
RPP40O75818 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPP40O75818 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPP40O75818 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.68■■□□□ 1.06
RPP40O75818 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
RPP40O75818 LINC00565-201ENST00000562710 2331 ntBASIC21.68■■□□□ 1.06
RPP40O75818 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPP40O75818 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPP40O75818 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPP40O75818 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPP40O75818 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.68■■□□□ 1.06
RPP40O75818 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RPP40O75818 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.67■■□□□ 1.06
RPP40O75818 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPP40O75818 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPP40O75818 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPP40O75818 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RPP40O75818 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPP40O75818 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPP40O75818 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPP40O75818 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.67■■□□□ 1.06
RPP40O75818 AC073210.2-201ENST00000430369 194 ntBASIC21.67■■□□□ 1.06
RPP40O75818 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPP40O75818 AC105036.2-201ENST00000569468 176 ntBASIC21.67■■□□□ 1.06
RPP40O75818 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPP40O75818 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.67■■□□□ 1.06
RPP40O75818 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPP40O75818 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPP40O75818 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RPP40O75818 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RPP40O75818 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RPP40O75818 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RPP40O75818 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.66■■□□□ 1.06
RPP40O75818 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RPP40O75818 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
RPP40O75818 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPP40O75818 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
RPP40O75818 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RPP40O75818 OR7E47P-201ENST00000546390 1422 ntBASIC21.65■■□□□ 1.06
RPP40O75818 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.65■■□□□ 1.06
RPP40O75818 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RPP40O75818 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPP40O75818 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPP40O75818 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPP40O75818 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
RPP40O75818 AC133552.2-202ENST00000575694 574 ntBASIC21.65■■□□□ 1.06
RPP40O75818 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
RPP40O75818 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RPP40O75818 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.65■■□□□ 1.06
RPP40O75818 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPP40O75818 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RPP40O75818 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPP40O75818 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPP40O75818 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RPP40O75818 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.64■■□□□ 1.06
RPP40O75818 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RPP40O75818 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RPP40O75818 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RPP40O75818 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPP40O75818 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.64■■□□□ 1.05
RPP40O75818 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPP40O75818 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RPP40O75818 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.64■■□□□ 1.05
RPP40O75818 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.64■■□□□ 1.05
RPP40O75818 AC008687.6-201ENST00000596318 630 ntBASIC21.64■■□□□ 1.05
RPP40O75818 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPP40O75818 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPP40O75818 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPP40O75818 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPP40O75818 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPP40O75818 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPP40O75818 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPP40O75818 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.63■■□□□ 1.05
RPP40O75818 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPP40O75818 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPP40O75818 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPP40O75818 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPP40O75818 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
RPP40O75818 CNN2P6-201ENST00000439038 900 ntBASIC21.63■■□□□ 1.05
RPP40O75818 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.63■■□□□ 1.05
RPP40O75818 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RPP40O75818 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
RPP40O75818 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPP40O75818 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.62■■□□□ 1.05
RPP40O75818 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPP40O75818 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPP40O75818 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RPP40O75818 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.62■■□□□ 1.05
RPP40O75818 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.62■■□□□ 1.05
RPP40O75818 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RPP40O75818 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPP40O75818 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.62■■□□□ 1.05
RPP40O75818 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RPP40O75818 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.62■■□□□ 1.05
RPP40O75818 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RPP40O75818 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPP40O75818 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms