Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.28■■□□□ 1
CDH16O75309 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDH16O75309 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH16O75309 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.28■■□□□ 1
CDH16O75309 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.28■■□□□ 1
CDH16O75309 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
CDH16O75309 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH16O75309 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CDH16O75309 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH16O75309 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH16O75309 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH16O75309 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDH16O75309 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.27■■□□□ 1
CDH16O75309 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH16O75309 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.27■■□□□ 1
CDH16O75309 GUSBP5-201ENST00000418136 578 ntBASIC21.27■■□□□ 1
CDH16O75309 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH16O75309 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CDH16O75309 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.27■■□□□ 1
CDH16O75309 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CDH16O75309 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDH16O75309 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
CDH16O75309 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH16O75309 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH16O75309 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.26■□□□□ 0.99
CDH16O75309 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
CDH16O75309 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
CDH16O75309 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH16O75309 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH16O75309 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH16O75309 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.26■□□□□ 0.99
CDH16O75309 MIR6724-1-201ENST00000616420 92 ntBASIC21.26■□□□□ 0.99
CDH16O75309 MIR6724-2-201ENST00000616483 92 ntBASIC21.26■□□□□ 0.99
CDH16O75309 MIR6724-4-201ENST00000617390 92 ntBASIC21.26■□□□□ 0.99
CDH16O75309 MIR6724-3-201ENST00000622482 92 ntBASIC21.26■□□□□ 0.99
CDH16O75309 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH16O75309 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDH16O75309 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH16O75309 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH16O75309 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH16O75309 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH16O75309 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH16O75309 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 AP004607.7-201ENST00000527152 1677 ntBASIC21.25■□□□□ 0.99
CDH16O75309 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CDH16O75309 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH16O75309 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CDH16O75309 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
CDH16O75309 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH16O75309 PLK5-205ENST00000642079 1969 ntBASIC21.25■□□□□ 0.99
CDH16O75309 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CDH16O75309 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CDH16O75309 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CDH16O75309 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CDH16O75309 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH16O75309 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH16O75309 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH16O75309 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH16O75309 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH16O75309 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH16O75309 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH16O75309 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH16O75309 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CDH16O75309 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH16O75309 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH16O75309 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH16O75309 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.23■□□□□ 0.99
CDH16O75309 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH16O75309 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CDH16O75309 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH16O75309 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH16O75309 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CDH16O75309 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH16O75309 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH16O75309 AC099791.2-201ENST00000605725 427 ntBASIC21.23■□□□□ 0.99
CDH16O75309 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.23■□□□□ 0.99
CDH16O75309 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CDH16O75309 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH16O75309 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH16O75309 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH16O75309 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH16O75309 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.22■□□□□ 0.99
CDH16O75309 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH16O75309 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH16O75309 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CDH16O75309 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.22■□□□□ 0.99
CDH16O75309 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH16O75309 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CDH16O75309 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms