Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TSPAN6O43657 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.11■□□□□ 0.97
TSPAN6O43657 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.11■□□□□ 0.97
TSPAN6O43657 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TSPAN6O43657 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN6O43657 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TSPAN6O43657 MIR663A-201ENST00000385250 93 ntBASIC21.11■□□□□ 0.97
TSPAN6O43657 HLA-L-209ENST00000420110 1011 ntBASIC21.11■□□□□ 0.97
TSPAN6O43657 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.11■□□□□ 0.97
TSPAN6O43657 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.11■□□□□ 0.97
TSPAN6O43657 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.11■□□□□ 0.97
TSPAN6O43657 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TSPAN6O43657 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TSPAN6O43657 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN6O43657 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TSPAN6O43657 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN6O43657 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN6O43657 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN6O43657 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN6O43657 NCF1B-203ENST00000435988 1254 ntBASIC21.1■□□□□ 0.97
TSPAN6O43657 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.1■□□□□ 0.97
TSPAN6O43657 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.1■□□□□ 0.97
TSPAN6O43657 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN6O43657 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN6O43657 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN6O43657 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN6O43657 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN6O43657 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN6O43657 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN6O43657 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TSPAN6O43657 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.09■□□□□ 0.97
TSPAN6O43657 TERF1P5-201ENST00000477545 1207 ntBASIC21.09■□□□□ 0.97
TSPAN6O43657 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.09■□□□□ 0.97
TSPAN6O43657 AC005181.1-201ENST00000604782 1256 ntBASIC21.09■□□□□ 0.97
TSPAN6O43657 AC013268.1-206ENST00000638368 961 ntBASIC21.09■□□□□ 0.97
TSPAN6O43657 AC112229.1-201ENST00000639295 961 ntBASIC21.09■□□□□ 0.97
TSPAN6O43657 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN6O43657 KRT16P2-201ENST00000414673 1423 ntBASIC21.09■□□□□ 0.97
TSPAN6O43657 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
TSPAN6O43657 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN6O43657 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TSPAN6O43657 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.08■□□□□ 0.97
TSPAN6O43657 FAM99A-202ENST00000538190 1989 ntBASIC21.08■□□□□ 0.97
TSPAN6O43657 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN6O43657 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN6O43657 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.08■□□□□ 0.97
TSPAN6O43657 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN6O43657 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.08■□□□□ 0.97
TSPAN6O43657 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.08■□□□□ 0.97
TSPAN6O43657 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TSPAN6O43657 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
TSPAN6O43657 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN6O43657 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN6O43657 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN6O43657 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN6O43657 CNN2P6-201ENST00000439038 900 ntBASIC21.07■□□□□ 0.96
TSPAN6O43657 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.07■□□□□ 0.96
TSPAN6O43657 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.07■□□□□ 0.96
TSPAN6O43657 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.07■□□□□ 0.96
TSPAN6O43657 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
TSPAN6O43657 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN6O43657 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN6O43657 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
TSPAN6O43657 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN6O43657 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.07■□□□□ 0.96
TSPAN6O43657 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN6O43657 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN6O43657 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN6O43657 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN6O43657 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.06■□□□□ 0.96
TSPAN6O43657 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.06■□□□□ 0.96
TSPAN6O43657 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.06■□□□□ 0.96
TSPAN6O43657 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TSPAN6O43657 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.06■□□□□ 0.96
TSPAN6O43657 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN6O43657 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TSPAN6O43657 AC026471.6-201ENST00000622954 1905 ntBASIC21.06■□□□□ 0.96
TSPAN6O43657 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TSPAN6O43657 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN6O43657 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN6O43657 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TSPAN6O43657 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN6O43657 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.05■□□□□ 0.96
TSPAN6O43657 GPX1P1-201ENST00000388829 606 ntBASIC21.05■□□□□ 0.96
TSPAN6O43657 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.05■□□□□ 0.96
TSPAN6O43657 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN6O43657 AC104771.1-201ENST00000603335 964 ntBASIC21.05■□□□□ 0.96
TSPAN6O43657 AL109923.1-201ENST00000618799 583 ntBASIC21.05■□□□□ 0.96
TSPAN6O43657 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TSPAN6O43657 C11orf96-202ENST00000528572 1834 ntBASIC21.05■□□□□ 0.96
TSPAN6O43657 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.05■□□□□ 0.96
TSPAN6O43657 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.05■□□□□ 0.96
TSPAN6O43657 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TSPAN6O43657 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN6O43657 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN6O43657 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.05■□□□□ 0.96
TSPAN6O43657 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
TSPAN6O43657 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN6O43657 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN6O43657 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms