Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
XRCC2O43543 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
XRCC2O43543 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.3■□□□□ 0.52
XRCC2O43543 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
XRCC2O43543 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.3■□□□□ 0.52
XRCC2O43543 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
XRCC2O43543 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
XRCC2O43543 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
XRCC2O43543 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
XRCC2O43543 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.3■□□□□ 0.52
XRCC2O43543 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.3■□□□□ 0.52
XRCC2O43543 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
XRCC2O43543 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC2O43543 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.29■□□□□ 0.52
XRCC2O43543 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
XRCC2O43543 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
XRCC2O43543 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
XRCC2O43543 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC2O43543 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC2O43543 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.29■□□□□ 0.52
XRCC2O43543 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.29■□□□□ 0.52
XRCC2O43543 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC2O43543 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC2O43543 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC2O43543 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.29■□□□□ 0.52
XRCC2O43543 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC2O43543 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.29■□□□□ 0.52
XRCC2O43543 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC2O43543 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC2O43543 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC2O43543 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC2O43543 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC2O43543 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
XRCC2O43543 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC2O43543 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.28■□□□□ 0.52
XRCC2O43543 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC2O43543 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC2O43543 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.28■□□□□ 0.52
XRCC2O43543 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC2O43543 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.28■□□□□ 0.52
XRCC2O43543 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.28■□□□□ 0.52
XRCC2O43543 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.28■□□□□ 0.52
XRCC2O43543 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.28■□□□□ 0.52
XRCC2O43543 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.28■□□□□ 0.52
XRCC2O43543 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
XRCC2O43543 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC2O43543 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC2O43543 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC2O43543 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC2O43543 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.27■□□□□ 0.52
XRCC2O43543 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC2O43543 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.27■□□□□ 0.52
XRCC2O43543 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC2O43543 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC2O43543 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.27■□□□□ 0.52
XRCC2O43543 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC2O43543 IRS3P-201ENST00000223076 1006 ntBASIC18.27■□□□□ 0.52
XRCC2O43543 MIR638-201ENST00000385237 100 ntBASIC18.27■□□□□ 0.52
XRCC2O43543 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.27■□□□□ 0.52
XRCC2O43543 AC105265.2-201ENST00000467189 838 ntBASIC18.27■□□□□ 0.52
XRCC2O43543 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.27■□□□□ 0.52
XRCC2O43543 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC2O43543 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.27■□□□□ 0.52
XRCC2O43543 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.27■□□□□ 0.51
XRCC2O43543 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
XRCC2O43543 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.27■□□□□ 0.51
XRCC2O43543 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.26■□□□□ 0.51
XRCC2O43543 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC2O43543 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC2O43543 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.26■□□□□ 0.51
XRCC2O43543 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC2O43543 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.26■□□□□ 0.51
XRCC2O43543 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.26■□□□□ 0.51
XRCC2O43543 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.26■□□□□ 0.51
XRCC2O43543 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC2O43543 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC2O43543 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.26■□□□□ 0.51
XRCC2O43543 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.26■□□□□ 0.51
XRCC2O43543 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC2O43543 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.26■□□□□ 0.51
XRCC2O43543 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC2O43543 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
XRCC2O43543 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC2O43543 FEM1AP4-201ENST00000443167 1987 ntBASIC18.26■□□□□ 0.51
XRCC2O43543 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC2O43543 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.26■□□□□ 0.51
XRCC2O43543 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.26■□□□□ 0.51
XRCC2O43543 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XRCC2O43543 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.25■□□□□ 0.51
XRCC2O43543 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XRCC2O43543 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XRCC2O43543 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XRCC2O43543 SLC25A24-204ENST00000569674 2357 ntBASIC18.25■□□□□ 0.51
XRCC2O43543 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
XRCC2O43543 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XRCC2O43543 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
XRCC2O43543 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.25■□□□□ 0.51
XRCC2O43543 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
XRCC2O43543 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
XRCC2O43543 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms