Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC188H7C350 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC188H7C350 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC188H7C350 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC188H7C350 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC188H7C350 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC188H7C350 AP006587.3-201ENST00000525742 1516 ntBASIC21.92■■□□□ 1.1
CCDC188H7C350 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC188H7C350 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCDC188H7C350 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CCDC188H7C350 AC073314.1-201ENST00000568729 2216 ntBASIC21.92■■□□□ 1.1
CCDC188H7C350 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CCDC188H7C350 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC188H7C350 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC188H7C350 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC188H7C350 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCDC188H7C350 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC188H7C350 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC188H7C350 PLK5-205ENST00000642079 1969 ntBASIC21.91■■□□□ 1.1
CCDC188H7C350 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC188H7C350 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC188H7C350 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC188H7C350 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC188H7C350 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC188H7C350 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC188H7C350 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC188H7C350 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC188H7C350 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC188H7C350 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC188H7C350 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC188H7C350 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC188H7C350 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC188H7C350 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC188H7C350 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC188H7C350 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC188H7C350 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC188H7C350 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC188H7C350 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC188H7C350 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC188H7C350 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
CCDC188H7C350 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.89■■□□□ 1.1
CCDC188H7C350 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC188H7C350 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC188H7C350 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
CCDC188H7C350 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC188H7C350 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC188H7C350 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC188H7C350 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC188H7C350 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC188H7C350 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC188H7C350 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC188H7C350 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CCDC188H7C350 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC188H7C350 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC188H7C350 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CCDC188H7C350 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC188H7C350 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC188H7C350 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC188H7C350 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC188H7C350 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC188H7C350 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCDC188H7C350 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.88■■□□□ 1.09
CCDC188H7C350 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.88■■□□□ 1.09
CCDC188H7C350 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CCDC188H7C350 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC188H7C350 AL356740.2-201ENST00000601559 647 ntBASIC21.88■■□□□ 1.09
CCDC188H7C350 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.88■■□□□ 1.09
CCDC188H7C350 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCDC188H7C350 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC188H7C350 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CCDC188H7C350 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CCDC188H7C350 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC188H7C350 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC188H7C350 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC188H7C350 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC188H7C350 KRT16P3-201ENST00000439127 1283 ntBASIC21.87■■□□□ 1.09
CCDC188H7C350 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC188H7C350 RARRES2P1-201ENST00000474487 481 ntBASIC21.87■■□□□ 1.09
CCDC188H7C350 AP005435.1-201ENST00000529293 1178 ntBASIC21.87■■□□□ 1.09
CCDC188H7C350 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC188H7C350 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC188H7C350 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC188H7C350 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms