Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21■□□□□ 0.95
H3BM21 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21■□□□□ 0.95
H3BM21 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21■□□□□ 0.95
H3BM21 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21■□□□□ 0.95
H3BM21 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21■□□□□ 0.95
H3BM21 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21■□□□□ 0.95
H3BM21 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21■□□□□ 0.95
H3BM21 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
H3BM21 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
H3BM21 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21■□□□□ 0.95
H3BM21 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H3BM21 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
H3BM21 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
H3BM21 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.99■□□□□ 0.95
H3BM21 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H3BM21 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.99■□□□□ 0.95
H3BM21 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
H3BM21 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
H3BM21 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.99■□□□□ 0.95
H3BM21 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.99■□□□□ 0.95
H3BM21 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.99■□□□□ 0.95
H3BM21 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.99■□□□□ 0.95
H3BM21 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3BM21 FAM99A-202ENST00000538190 1989 ntBASIC20.98■□□□□ 0.95
H3BM21 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3BM21 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3BM21 DUX4L16-201ENST00000555130 1264 ntBASIC20.98■□□□□ 0.95
H3BM21 AL121832.2-201ENST00000610979 668 ntBASIC20.98■□□□□ 0.95
H3BM21 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.98■□□□□ 0.95
H3BM21 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3BM21 C11orf96-202ENST00000528572 1834 ntBASIC20.98■□□□□ 0.95
H3BM21 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3BM21 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3BM21 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
H3BM21 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.97■□□□□ 0.95
H3BM21 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
H3BM21 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3BM21 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
H3BM21 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H3BM21 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
H3BM21 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3BM21 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3BM21 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
H3BM21 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.97■□□□□ 0.95
H3BM21 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.97■□□□□ 0.95
H3BM21 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
H3BM21 AC005181.1-201ENST00000604782 1256 ntBASIC20.97■□□□□ 0.95
H3BM21 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H3BM21 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3BM21 AP006587.3-201ENST00000525742 1516 ntBASIC20.97■□□□□ 0.95
H3BM21 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3BM21 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H3BM21 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
H3BM21 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
H3BM21 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
H3BM21 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.96■□□□□ 0.95
H3BM21 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
H3BM21 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
H3BM21 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H3BM21 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
H3BM21 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.95■□□□□ 0.94
H3BM21 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.95■□□□□ 0.94
H3BM21 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
H3BM21 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
H3BM21 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
H3BM21 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.94■□□□□ 0.94
H3BM21 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H3BM21 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
H3BM21 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
H3BM21 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.94■□□□□ 0.94
H3BM21 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H3BM21 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H3BM21 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.94■□□□□ 0.94
H3BM21 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
H3BM21 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.94■□□□□ 0.94
H3BM21 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3BM21 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3BM21 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3BM21 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3BM21 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.93■□□□□ 0.94
H3BM21 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.93■□□□□ 0.94
H3BM21 EEF1DP3-203ENST00000566025 782 ntBASIC20.93■□□□□ 0.94
H3BM21 AC053503.5-201ENST00000601508 636 ntBASIC20.93■□□□□ 0.94
H3BM21 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.93■□□□□ 0.94
H3BM21 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
H3BM21 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.93■□□□□ 0.94
H3BM21 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms