Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA2E9PIF3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NPIPA2E9PIF3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NPIPA2E9PIF3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 EP400NL-214ENST00000641289 2402 ntBASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 AC104771.1-201ENST00000603335 964 ntBASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 MYCNOS-205ENST00000641950 531 ntBASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPA2E9PIF3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPA2E9PIF3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 AL355802.2-201ENST00000402069 882 ntBASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 NCF1B-203ENST00000435988 1254 ntBASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 AC231657.2-201ENST00000624556 255 ntBASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 AP006587.3-201ENST00000525742 1516 ntBASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPA2E9PIF3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 GPX1P1-201ENST00000388829 606 ntBASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 AC007322.1-201ENST00000426983 750 ntBASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 AC010141.2-201ENST00000452426 721 ntBASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 DUX4L16-201ENST00000555130 1264 ntBASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 AC138907.5-202ENST00000569484 235 ntBASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.17■□□□□ 0.66
NPIPA2E9PIF3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 C11orf96-202ENST00000528572 1834 ntBASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.16■□□□□ 0.66
NPIPA2E9PIF3 AC079834.2-201ENST00000609776 1949 ntBASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms